Pseudomonas syringae pv. tomato DC3000, PSPTO_3230
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0015031 | protein transport |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF029745
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.10.20.310 | membrane protein fhac | - | - | 62 | 152 | 1.1E-16 |
| PIRSF | PIRSF029745 | FhaC | IPR027282 | Two partner secretion pathway transporter | 1 | 569 | 0.0 |
| Gene3D | G3DSA:2.40.160.50 | membrane protein fhac: a member of the omp85/tpsb transporter family | - | - | 185 | 567 | 4.7E-86 |
| PANTHER | PTHR34597 | SLR1661 PROTEIN | - | - | 11 | 565 | 0.0 |
| Pfam | PF08479 | POTRA domain, ShlB-type | IPR013686 | Polypeptide-transport-associated, ShlB-type | 77 | 152 | 9.4E-25 |
| Pfam | PF17287 | POTRA domain | IPR035251 | ShlB, POTRA domain | 157 | 208 | 3.8E-17 |
| Coils | Coil | Coil | - | - | 38 | 58 | - |
| Pfam | PF03865 | Haemolysin secretion/activation protein ShlB/FhaC/HecB | IPR005565 | Haemolysin activator HlyB, C-terminal | 213 | 531 | 2.8E-96 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.