Pseudomonas syringae pv. tomato DC3000, PSPTO_2874
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pst03070 | Bacterial secretion system | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53300 | vWA-like | IPR036465 | von Willebrand factor A-like domain superfamily | 228 | 423 | 7.02E-15 |
| CDD | cd00198 | vWFA | - | - | 227 | 413 | 3.5708E-12 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | IPR036465 | von Willebrand factor A-like domain superfamily | 226 | 407 | 4.7E-12 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.