Strain | Pseudomonas aeruginosa strain AZPAE14935 AZPAE14935_contig_29, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGTGGCGAACTCAGTCCGTTCCGCCTGCGCCTGGCCGAGCGCGGACCCGAGGGGCGGGCGTTGTCGCTGAGCAGCGACGGTTTCCGCCTGCCACGGGTC GAGGTGGCGCGGCGATGAAGCGCGCGCGTGGTTTCACCCTGCTGGAAGTGCTGGTGGCCCTGGCGATCTTCGCCATGGTCGCGGCCAGCGTGCTCAGTGC CAGCGCGCGCAGCCTGCAGAACGCCTCGCGGCTGGAAGACAAGACCCTGGCGATGTGGATCGCCGACAACCGTCTCAACGAATTGCAACTGGAACAGACG CCGCCCTCCAGCGGCCGCAACCAGGGCGAGCTGGAGTTCGCCGGGCGCCGCTGGGAGTGGCGCACCCAGGTCGACAGCACCGCCGAGCAGGATATGCGGC GGGTGATCGTCTGGGTCGCGGCGAAGCCCCTTGGCCGCGAGCGTGGCAGCATCGAGGAACGCGCCGCGGCGCGCCTCGTCGGTTTCCTCGGGAGCCAGCC
|
|
DNA Sequence for Gene |
>NS51_RS28760
ATGAGGCTACAGCGGGGCTTCACCCTGCTCGAGCTGCTGATCGCCATCGCCATCTTCGCCCTGCTGGCCCTGGCCACCTACCGCATGTTCGACAGCGTGA TGCAGACCGACCAGGCGACTCGCGTGCAGGAGCAGCGCATGCGCGAGCTGGTGCGGGCGATGGGCGCGCTGGAGCGCGACCTGACCCAGGCGGTCGAACG TCCGGTACGCGACGAACTGGGCGATAACCGTGGCGCCTTCCTCAGCGAGGGCGAGAACGACCAGATCGTCGAATTCACCCGTGGCGGCTGGCGCAACCCG CTCGGCCAGGCGCGCTCGCGCCTGCAGCGGGTGCGCTGGTCGCTGTCCGGGGAGACCCTCGAACGCCGCTACTGGCTGGTTCTGGACCGCGCCCAGGACA GCAAGCCACGGGTGCAGCAGGTGCTGGACGGGGTTACCGCGCTGAGCTGGCGCTTCCTCGACAAGGAGCACAACTGGCAGGGCCACTGGCCGACCAACGA AGGCAGCGAGGAGGAGCGCCTGGAAAGCCTGCCGCTGGCGGTGGAGATGACCCTGGAGCACCGCCACTACGGCAAGCTGGTGCGCGTCTGGCGTCTGCTC GATCCGCCGCTCAAGCAGGACCAGCCGCAGGGCCAGCCGGGCGGCGAGAATGGCGAGAACGGCGAGGGCGGGGTGCCGCAGCCGCCGGAAGGCATGCCGG GGGCGCCGGAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGCGCGGGCAGAGCGGCGTCGCGCTGATCACCGTGCTGCTGGTGGTGGCGGTGGTGACCATCGTCTGCGCCGGGCTGATCATCCGCCAGCAGTTGGCGAT ACGCAGCAGCGCCAACCAGTTGCACGTGCGCCAGGCCTGGCACTATGCGCTGGGCGGCGAACGCCTGGCGGAAGCGGTGCTGCGCCGCGACCTGCGCCAG GGCGGCGAGAATACCCGCGAGCCGGTGGACCACCTGGGCGAGGCCTGGGCTCGACCGATGACGCCGTTCAAGCTGGACGACGGCGGCGAGCTGCGGGTGC GGATCGAGGACCCCAGCGGGCGTTTCAATCTCAACGGACTGGTGCGCAAGCGCAAGGTCAAGCCGGATTCGGTGAAGCAGTTCCGTCGCCTGCTGGCCAC CCTGGGGATGAAGGAAGAGATCGTCCAGGGCTTGCCGGACCGGCTGGCCGACTGGCTCGACGCCGACCAGAATCCGCAGGGCGAGCAAGGCGCCGAGGAC
|
|
Amino Acid Sequence |
>general secretion pathway protein J
MRLQRGFTLLELLIAIAIFALLALATYRMFDSVMQTDQATRVQEQRMRELVRAMGALERDLTQAVERPVRDELGDNRGAFLSEGENDQIVEFTRGGWRNP LGQARSRLQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRFLDKEHNWQGHWPTNEGSEEERLESLPLAVEMTLEHRHYGKLVRVWRLL DPPLKQDQPQGQPGGENGENGEGGVPQPPEGMPGAPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|