Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGTACCTGCAACAGCACGGTACGCCGCTGCAACTGGAGGATCTTGCGCACCATCAGGTCATCGAATATTTTTCGGCCAGTACCAGCAAACGCTATGGTCT GGAGTTTGTGGGTGAAGGCGGGGCGCCTGATCACGGCCTGGCCTGTTCGATCTCGGTCAACAGCGCCGATGGCTATGTGGCTGCCTGCGAGGCCGGCTTC GGCCTGATACAAGTGCCGCGCTACCACATTGCCGGGCAATTGCGCAGCGGCACGCTGGTCGAGGTGCTACGCAGGCACCGCCCACCGCCGTTGGCGCTGA CGGCGCTTTATCCGCCGCACAGGCAGTTGTCACGACGGGTCAGGGTGTTCGTCGATTGGCTGGTGGAATTGTGTGACCACCCGGATATCCGGGACAGACT GGTTTCCTGAACAAATTCGGAATTATCCGATATAGGCCGCGGCACGCTTTCGTGGTTAACTTCCGGCTCTTTATATTCATTTCAAGAAGGAACGTGTTTC
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DNA Sequence for Gene |
>PSPTO_2752
|tpx
ATGGCTCAAGTGACCCTTAAAGGCGGCCCCGTTCAAGTCAATGGCACCCTGCCTGAAGTCGGCAGCAAGGCAGCAGCCTTCACGCTGGTGGGCGAAGGTC TTGCTGACAAGACCCTGGCTGACTTCGCTGGCAAGCGCAAGGTGCTGAACATCTTCCCGAGCGTCGATACTCCGACCTGCGCAACATCGGTACGTAAGTT CAACGCCCAGGCCAACGAGCTGAACAACGCCGTTGTGTTGTGCATCTCCGCCGACCTGCCGTTCGCCCAGGCACGCTTCTGCGGCTCCGAAGGTCTGGAA AACGTCAAGAACCTGTCTTCGTTCCGCAGTGCTGATTTCAGCGAGCATTACGGCGTTGCCATTGCCGACGGTCCGTTGAAGGGCCTGACCGCTCGCGCAG TGGTTGTGCTGGACGAAAACGACACTGTGCTGCACAGCGAACTGGTATCGGAAATTGCCGAAGAGCCAAATTACGACGCTGCACTGGCTGTACTGAAGTA A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGTTCTGCACTACTTCGACGGTCTGAATCTGTTCAGGCCGTTTTTTATTTTTGCTTCATACGGTTATCGAAAGTAAGCGCTTGGTAAAGGCGCTTTGCTT GTCACACATCTGTGCTTATTGTTCAGCCTTCTTAATGAAGCCCCACCTGTAATGGTTGATTTATTCATGCAATCGTCTGGCTCCCGTAAATCCCGTCGCT GGTTGATCAGTGTGTTGATCCTGTTGGTCATTGTCGCCCTGTGTTGGTGGTTATGGCCTGCGTCCACGCTCGACAAAGGGGCCGAGAGCAAGCGGGCGGG CGCCAGTGGCATGGGCCGGCCGGGCTTTGGTGCGTCGGCTATCGCCGTTCCGGTGCGTGTTGCCCCGGCCACAGAAGGCGAATTTCCTATTTTTTACAAG GCGCTCGGCACGGTCACGGCGACCAATACCATCAATGTGCGCAGCCGGGTGGCGGGTGAGCTGGTCAAGCTTTACTTCCAGGAAGGCCAGAAGGTCAAGG
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Amino Acid Sequence |
>thiol peroxidase
MAQVTLKGGPVQVNGTLPEVGSKAAAFTLVGEGLADKTLADFAGKRKVLNIFPSVDTPTCATSVRKFNAQANELNNAVVLCISADLPFAQARFCGSEGLE NVKNLSSFRSADFSEHYGVAIADGPLKGLTARAVVVLDENDTVLHSELVSEIAEEPNYDAALAVLK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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