Pseudomonas syringae pv. tomato DC3000, PSPTO_2739

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003995	acyl-CoA dehydrogenase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:cd01156	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47203	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0050660	flavin adenine dinucleotide binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02771	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pst01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pst00280	Valine, leucine and isoleucine degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like	IPR036250	Acyl-CoA dehydrogenase-like, C-terminal	294	445	6.93E-46
Pfam	PF02771	Acyl-CoA dehydrogenase, N-terminal domain	IPR013786	Acyl-CoA dehydrogenase/oxidase, N-terminal	74	183	9.1E-37
PANTHER	PTHR43884	ACYL-COA DEHYDROGENASE	-	-	72	445	0.0
SUPERFAMILY	SSF56645	Acyl-CoA dehydrogenase NM domain-like	IPR009100	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	63	307	4.45E-86
FunFam	G3DSA:1.10.540.10:FF:000022	Isovaleryl-CoA dehydrogenase isoform 2	-	-	62	184	1.1E-58
FunFam	G3DSA:1.20.140.10:FF:000003	isovaleryl-CoA dehydrogenase, mitochondrial	-	-	300	444	2.8E-80
Pfam	PF02770	Acyl-CoA dehydrogenase, middle domain	IPR006091	Acyl-CoA oxidase/dehydrogenase, middle domain	187	282	2.6E-27
PIRSF	PIRSF016578	PIGM	-	-	195	447	1.8E-9
CDD	cd01156	IVD	IPR034183	Isovaleryl-CoA dehydrogenase	69	444	0.0
Pfam	PF00441	Acyl-CoA dehydrogenase, C-terminal domain	IPR009075	Acyl-CoA dehydrogenase/oxidase, C-terminal	295	442	5.6E-41
PIRSF	PIRSF016578	PIGM	-	-	71	160	9.7E-4
Gene3D	G3DSA:2.40.110.10	-	IPR046373	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	186	299	8.7E-42
Gene3D	G3DSA:1.10.540.10	-	IPR037069	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily	49	184	1.2E-39
Gene3D	G3DSA:1.20.140.10	-	-	-	300	442	2.4E-46
FunFam	G3DSA:2.40.110.10:FF:000004	Isovaleryl-CoA dehydrogenase, mitochondrial	-	-	186	299	3.6E-55

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.