Pseudomonas syringae pv. tomato DC3000, PSPTO_2732 (metH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2732
NCBI Old Locus TagPSPTO2732
Name
metH
Synonym: PSPTO2732
Replicon chromosome
Genomic location 3030852 - 3034571 (- strand)

Cross-References

RefSeq NP_792538.1
GI 28869919
Entrez 1184386
INSDC AAO56233.1
NCBI Locus Tag PSPTO_2732
NCBI Old Locus Tag PSPTO2732
UniParc UPI0000008CC2
UniProtKB Acc Q881Z7
UniProtKB ID Q881Z7_PSESM
UniRef100 UniRef100_Q881Z7
UniRef50 UniRef50_P13009
UniRef90 UniRef90_G8Q6L5

Product

Feature Type CDS
Coding Frame 1
Product Name
5-methyltetrahydrofolate--homocysteine methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -48.30
Kyte-Doolittle Hydrophobicity Value -0.194
Molecular Weight (kDa) 136.1
Isoelectric Point (pI) 4.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 508 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003557 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2732
Search term: metH

Human Homologs

Ensembl 110, assembly GRCh38.p14
5-methyltetrahydrofolate-homocysteine methyltransferase [Source:HGNC Symbol;Acc:HGNC:7468]
E-value: 0.0e+00
Percent Identity: 52.2
Ensembl 110, assembly GRCh38.p14
5-methyltetrahydrofolate-homocysteine methyltransferase [Source:HGNC Symbol;Acc:HGNC:7468]
E-value: 0.0e+00
Percent Identity: 52.1
Ensembl 110, assembly GRCh38.p14
5-methyltetrahydrofolate-homocysteine methyltransferase [Source:HGNC Symbol;Acc:HGNC:7468]
E-value: 0.0e+00
Percent Identity: 54.4
Ensembl 110, assembly GRCh38.p14
5-methyltetrahydrofolate-homocysteine methyltransferase [Source:HGNC Symbol;Acc:HGNC:7468]
E-value: 0.0e+00
Percent Identity: 48.4
Ensembl 110, assembly GRCh38.p14
5-methyltetrahydrofolate-homocysteine methyltransferase [Source:HGNC Symbol;Acc:HGNC:7468]
E-value: 0.0e+00
Percent Identity: 54.7
Ensembl 110, assembly GRCh38.p14
5-methyltetrahydrofolate-homocysteine methyltransferase [Source:HGNC Symbol;Acc:HGNC:7468]
E-value: 0.0e+00
Percent Identity: 51.3

References

No references are associated with this feature.