Strain | Pseudomonas aeruginosa strain AZPAE14935 AZPAE14935_contig_13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGTTCCAAGCGTACCGGTCCGGACCTGGCCCGCGTCGGTAGCCGCTACTCCGACGACTGGCACCGCGCGCACCTGTTCAACCCGCGCAACGTGGTGCCC GAGTCGAAGATGCCGGCCTACCCGTGGCTGGTGGAGAACAAGCTCGACGGCAAGGACATCGAGAAGAAGCTCGAAGTGATGCGCACCCTCGGCGTGCCCT ATACCGACGAAGACATCAAGGGCGCCAAGGACTCGCTGAAAGGCAAGACCGAAATGGATGCCGTGGTCGCCTACCTGCAGGTGCTCGGCACCTCGATCAA GAACAAACGGTGACGGCAATGGATATCGGGACGCTGCGAGGACTCGGCACGCTGCTGATCATGGTCGCCTTCATCGGTCTGGTGATCTGGGCCTACAGCG GCAAACGCAAGAAGAGCTTCGACGAAGCGACGATGCTGCCCTTCGCAGACGATCCCGAAGCCAAAAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGA
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DNA Sequence for Gene |
>NS51_RS19065
ATGACCACCTTCTGGAGTCTGTACATCACAGCTCTTACCGTCGGTACCTTGATCGCCCTGCTCTGGCTGGTCTTCGCCACCCGCAAGGGCGAGGCCAAGG GTACTACCGAAAAGACCATGGGCCACTCCTACGACGGCATCGAGGAGTACGACAATCCGCTGCCGAAGTGGTGGTTCATGCTGTACATCGGCACCATCGT CTTCTCCGTCGGCTACCTAGTCCTGTACCCGGGCCTGGGTAACTGGAAAGGCGTGCTGCCGGGCTACGAGGGCGGCTGGACCCAAGACAAGCAGTGGGAA CGCGAGATGAACATCGCCCAGGAGAAGTACGGGCCGATCTTCGCCAAGTACGCCGCCATGCCCATCGAGGAAGTGGCCAAGGACGAGCACGCCATGAAGA TGGGCAGCCGCATGTTCGCCACCTACTGCTCGATCTGCCACGGTTCCGACGCCAAGGGCGCCCTCGGCTTCCCCAACCTGGCCGACAACGAGTGGCGCTG GGGCGGTGACCCGCAGAGCATCGAGACCACCATCCTCGGCGGTCGCCACGCGATCATGGCGGCCTGGGGCGACATCCTCGGCGAAGACGGGGTGAAGAAC GTCGCCGCCTACGTCCGCACCGAACTCGCCGGGCTGAAGCTGCCGGAAGGCACCAAGGCCGACGTCGAGGCCGGCAAGCAGATCTTCTCGGTCAACTGCG TCGCCTGCCACGGCCCGGAAGGCAAGGGTACCGCCCTGGTCGGCGCGCCGAACCTGACCAACCCCGGCGCGTTCATCTACGGCTCCAGCTACGCCCAGCT CCAACAAACCATCCGCCATGGCCGCCAGGGCCAGATGCCGGCCCAGGAGCCCTACCTGGGCAAGGAAAAGGTGCACATCCTGGCCGCCTACATCTACAAC CTGTCGCACAACCAGGGCAGCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCCTCCCCCCACCCGCGCCCTCCCGGGCGCGGGTCCTTCCCCCGGTCTCAGACCTTAGTCCCAGGCGGCGCGACGAAGTGTCGCACCAGCGGACGCCTT TCCTACCCTTCCTTTTCAATCGCGTCTAAGCTGCTCTGCATTCGTCCCTCTCCGGCAGAGCGACGGGACACCTAACTTCACCGGCCGAACCCACTCGCCC GGATAGCGCCAAAAAGCCATACGGCCGCCTTGGAAAGCGCTCTGAAGCAGGCATCAAACTGGCGTCGCCCCTGGCCTGGCGCGTTGCAATGCCCACCCGC TTTCTCCATACTTGCCGCCGATTTTTTGTCCCTAAAAAAGTCCATTAACCGTGGAACCCCTAGCATGAGCACAGCAATCAGTCAGACTGCTTATAACTAT AAGGTGGTCCGCCAGTTCGCCGTTATGACGGTGGTCTGGGGGGTCATTGGAATGGGTCTCGGTGTCCTGATCGCCGCCCAACTGGTATGGCCCGAATTGA
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Amino Acid Sequence |
>cytochrome CBB3
MTTFWSLYITALTVGTLIALLWLVFATRKGEAKGTTEKTMGHSYDGIEEYDNPLPKWWFMLYIGTIVFSVGYLVLYPGLGNWKGVLPGYEGGWTQDKQWE REMNIAQEKYGPIFAKYAAMPIEEVAKDEHAMKMGSRMFATYCSICHGSDAKGALGFPNLADNEWRWGGDPQSIETTILGGRHAIMAAWGDILGEDGVKN VAAYVRTELAGLKLPEGTKADVEAGKQIFSVNCVACHGPEGKGTALVGAPNLTNPGAFIYGSSYAQLQQTIRHGRQGQMPAQEPYLGKEKVHILAAYIYN LSHNQGSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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