Pseudomonas aeruginosa AZPAE14935, NS51_RS18500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14935 AZPAE14935_contig_13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCGGCAGTGCATCGGCGGCTTGCAGCAGAGCCTGCGGACCCGCAGCGAACTGAAGAACGAACTGCGCCTGTCGCTGAGCACGTTGCGCGATACCGGCA AGAATCCCTTGCGCTTCAGCGCCGATGCCAGCGAGGCGCTGGGGCATCTGCTACGGGATGGCAAGCCTGGCCAGTTGAGTGGCGAACAGGCCGTCGCACG CAGTTTCCGCGACCTCCAGGCGCACCAGGTGGCGCTGCTCGGCGCCAGCCGGGCGGCGGTGCGCGCGACCCTCGAGCATTTCTCGCCGCAGCAGCTGGCC CTGCGTTTCGAGCGCGACGGTCGCCGGCCGTTGCTGGCCACCTCGGGCAGCCGCTGGCGTGCCTACGGTCGCTACCACCAGTCGCTATGCCAGGACGACG ATTGGAGCGAGCGTCTGTTGGCGCGTGATTTCGCCCAGGCCTACGAAGAGCAGGTTCGCCTGATTTCCACCCTCTACACCGAGCACCAAGGATGATCGCC
DNA Sequence for Gene
>NS51_RS18500
ATGTCTCGTCGCCCGATCCCGCCAGCCAGGGCGCTGGCCATGCTCGCCGTCCTGGCGCTGCTGGCCGGCTGTTCCACGCTGTCGCCGTATTCCAGACTGA CCAAGCTCGACCTCGCCCTGAGCGCCGGCGAGCGGGTCAATCCCGACCTCAATGGCCGGCCGTCGCCGGTGGTAGTGCGGCTGTTCGAGCTGAAACACCC GGTGGCGTTCGAGAACGCCGACTTCTTCAGCCTCTACGAACGTCCCAAGGAGACCCTGGACCCCGACCTGGTGACCAGCGAGGAGCTGGAGCTGCGTCCC GGCGAGCGGGTCGAACTCAAGCTCAGCGTGGGGGAGGGGAGCCGCTACGTGGGCGTGCTCGCCGCCTACCGTGATCTCGGCGAGGCAAGCTGGCGCTACG TGGTGCCGGTCACGGCGAAAGAGCTGACCCGGGTAGAGCTGAAGCTGGGCCAGAAGGGCATCCTGAATGCCGGCGAACTGCTCGGCAAGGCGGGTGACGC GCGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGTGCACAAGATCGTCTGGCAGGAAGGCATGCTGCTGCGCCCGCAGCACCTGCAACACAACGACCGCTACTACGACAACCAGATGAAGGCCCGGACCCA GTTGCTGGGCAGCTACAACTGGGGCTTCCTCGCCCTGGAGCTGGACCGCCAGTTCCTCAACATGGGCAAGCTGGTGATCAGCCAGGCCTCCGGCGTATTG CCCGACGGCAGCCTGTTCGAACTCGGCGGCAATACCGAGCCGCTCGCCCTCGACGTGCCGCCCAATACCTCGAACGTGCCGATCTACCTGGCCCTGCCGC TGGTCACCGGAAACCACATCGAGGCGCGTCGGCCGGAGCAGGCCGAGGTCCTGGCGCGCTATACCGCCTACGACCTGGAGGTGGCGGACTCCAACGCCGG CGAGGATTCCATGGTGCAGGTCAGCTGCGCGCGGCCGGATTTTCGCCTGCTGCTCGGCGAGCAGCAGAGCGACCAGGCCTACGTCAAACTGAAGGTGGCG
Amino Acid Sequence
>type VI secretion protein
MSRRPIPPARALAMLAVLALLAGCSTLSPYSRLTKLDLALSAGERVNPDLNGRPSPVVVRLFELKHPVAFENADFFSLYERPKETLDPDLVTSEELELRP GERVELKLSVGEGSRYVGVLAAYRDLGEASWRYVVPVTAKELTRVELKLGQKGILNAGELLGKAGDAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site