Pseudomonas syringae pv. tomato DC3000, PSPTO_2275 (aroF-1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00793
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009073 aromatic amino acid family biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00034
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00034
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pst01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst00400 Phenylalanine, tyrosine and tryptophan biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00793 DAHP synthetase I family IPR006218 DAHP synthetase I/KDSA 45 341 2.9E-94
NCBIfam TIGR00034 JCVI: 3-deoxy-7-phosphoheptulonate synthase IPR006219 DAHP synthase, class 1 8 349 0.0
SUPERFAMILY SSF51569 Aldolase - - 8 349 0.0
PIRSF PIRSF001361 DAHP_synthase IPR006219 DAHP synthase, class 1 2 355 0.0
FunFam G3DSA:3.20.20.70:FF:000005 Phospho-2-dehydro-3-deoxyheptonate aldolase - - 1 354 0.0
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 3 351 0.0
PANTHER PTHR21225 PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE DAHP SYNTHETASE IPR006219 DAHP synthase, class 1 6 349 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.