Pseudomonas syringae pv. tomato DC3000, PSPTO_2220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CAGCCGCCTGACTTTGCCCTCAGCGATACGGTTTACCGAGCGCCAGGCGATGGCGTTCGTTCACGGCATTCGCTGTCCGACACAATTGGTGATTGCGTCG GACGGCATGCTGGCGAAAAAACACGAGCTGCTGTCCGGCCTGCCGTTTGACGTTGCACGGCTGCCCGGCGGGCATCATTTGCACCTGGACGACGAGGAGG GAGCGCGCTCTGTTGCACACTGTATCAATCGCTTTTTCGCTGCTTCTTGACTTGAGGCCGGCAACTGCCGACGCTGGGCGGGTTGAAACAGGAGTCAACC GTGATGGATCAACCCGCAGCCCGCCATGATCGCCTTGCAGGCGATTACCCACATCCTTTCTTTACGCTTGCCTGCCGATGAGAGCACTCATGCTTTTAAC ACGTGTTCCAGTCGCCGCGTTGTGCGCAGTCATTTTCAGCGGCCTGTTCAGCAGCGCACTCAGCGCCGACGATCTGGAAGGCAGCCGTGATCTGGACATT
DNA Sequence for Gene
>PSPTO_2220
GTGCCGCGTCTGGCCGATGCCGAGATCGTTGACTACCGTCCCGTCGCCGAACTGGAGCGTGTCTACCCGATGGGCTCGATCCGCAAGATCAGTGGCCAGT TGCGATTCGACGGACAGGTCAGCGCGCGCGGCAACCTGACCTCGGTCACCTATCAGTTACCTGCCGAACATACGTCCGACGACGCTTTTACCGCCGCGCG CCAAGCCTTGCAGCAGCAGGGCGCTGAATTGCTGTTCTGGTGTCAGGCACGCGACTGCGGAGAAAGCAGCCTGTGGGCCAACGAAGTGTTCGGCAACGCC AAGCTGTTCGGCGCGGACGACCGGCAGGCGTATCTGCTGTTGCGCATGGCAGAGCCCCGCAATGACACTCTGGTGGCGCTCTACAGCATTACCCGCGGCA ATCGTCGAGCCTATCTGCACGTCGAGCAGTTCGAAGTCGCTGCGCCACTGGGCGAGCTGCTGCCCACCTCGGCGACGCTGCTGCGTCAATTGAAAAGCAC CGGCAAGCTGGAACTGCCCCGGCTTGCCGGCGAGCCACAAGAGGCTTGGGTCACGCTGGTTTCTCGCGGCCTCAACCTCGACAGTTCACTGCGTTTGATC GTGTCCGGCGTCAGCGCAGGTGCCTGGCGTGACGCGTTGATCGGCAAAGGTGTTCGCGCTGCCCGGCTGGAGACCGGGGCGCTCGATGGCAAAGGGCTGA AAATCGAGGTCATCCGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCACTGATTGGCGAACATGGCGAACATGGCGAACAACGGCTGACGCCAGCCCTGTTCGCCTTTATGCTCGCTACCTCCGAGCCCTTCTGATGGATGCCGC ATGTTCAACAATGATCGTTTGCTGGTGCAGATTCTGCTGCTGGCGCTATTCGGCGCCTGTCTCTGGGTAATGGCACCGTTCTGGTCGGCGCTGGTCTGGG GCGCGGTGCTGGCGTTTGCCAGTTGGCCGTTGATGCGTTTGCTGACGCGCTGGTTCAAGGGCCGTGAGTCGCTGGCTGCGCTGGTGATGTGCTTGTGCTG GATGTTGCTGGTCGCGGCACCACTCGTCTGGCTGGGCTTCAATCTCGCCGACCATGTGCGTGACGCCACGGCGTTGATCAAGGATATACAGGTCGACGGG CTGCCTGATCCGCCGCAATGGCTGGCGGGTATTCCGCTGGTGGGCGAGCGCCTGGTGGGGTTGTGGACCACCATTGACCAGCAGGGCGCGGCGTTCATGA
Amino Acid Sequence
>hypothetical protein
MPRLADAEIVDYRPVAELERVYPMGSIRKISGQLRFDGQVSARGNLTSVTYQLPAEHTSDDAFTAARQALQQQGAELLFWCQARDCGESSLWANEVFGNA KLFGADDRQAYLLLRMAEPRNDTLVALYSITRGNRRAYLHVEQFEVAAPLGELLPTSATLLRQLKSTGKLELPRLAGEPQEAWVTLVSRGLNLDSSLRLI VSGVSAGAWRDALIGKGVRAARLETGALDGKGLKIEVIR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site