Pseudomonas syringae pv. tomato DC3000, PSPTO_2145

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2145
NCBI Old Locus Tag	PSPTO2145
Name	Synonym: PSPTO2145
Replicon	chromosome
Genomic location	2327858 - 2329093 (- strand)

Cross-References

RefSeq	NP_791967.1
GI	28869348
Entrez	1183792
INSDC	AAO55662.1
NCBI Locus Tag	PSPTO_2145
NCBI Old Locus Tag	PSPTO2145
UniParc	UPI0000008A98
UniProtKB Acc	Q884E8
UniProtKB ID	Q884E8_PSESM
UniRef100	UniRef100_Q884E8
UniRef50	UniRef50_G8Q016
UniRef90	UniRef90_Q884E8

Product

Feature Type	CDS
Coding Frame	1
Product Name	iron-regulated membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	10.62
Kyte-Doolittle Hydrophobicity Value	0.153
Molecular Weight (kDa)	46.2
Isoelectric Point (pI)	9.91

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 124 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003129 (482 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2145 Search term: iron-regulated membrane protein

Human Homologs

References