Pseudomonas syringae pv. tomato DC3000, PSPTO_1973 (fliQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_1973
NCBI Old Locus TagPSPTO1973
Name
fliQ
Synonym: PSPTO1973
Replicon chromosome
Genomic location 2157899 - 2158168 (+ strand)

Cross-References

RefSeq NP_791796.1
GI 28869177
Entrez 1183618
INSDC AAO55491.1
NCBI Locus Tag PSPTO_1973
NCBI Old Locus Tag PSPTO1973
UniParc UPI00000089F0
UniProtKB Acc Q884W3
UniProtKB ID Q884W3_PSESM
UniRef100 UniRef100_A0A038GAJ5
UniRef50 UniRef50_D4ZIB5
UniRef90 UniRef90_W0HCA8

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar biosynthetic protein FliQ
Synonyms
Evidence for Translation
Charge (pH 7) -2.05
Kyte-Doolittle Hydrophobicity Value 1.311
Molecular Weight (kDa) 9.9
Isoelectric Point (pI) 4.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Flagellar
Note: This is based on PSORTb V3.0 secondary localization prediction
 Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6S3R PROTEIN TRANSPORT 06/25/19 Structure of the FliPQR complex from the flagellar type 3 secretion system of Pseudomonas savastanoi. Pseudomonas savastanoi pv. phaseolicola; Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) 3.5 ELECTRON MICROSCOPY 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 311 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001364 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1973
Search term: fliQ

Human Homologs

References

No references are associated with this feature.