Pseudomonas syringae pv. tomato DC3000, PSPTO_1934 (flgC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0030694 bacterial-type flagellum basal body, rod
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01395
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071973 bacterial-type flagellum-dependent cell motility
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01395
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pst02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30435 FLAGELLAR PROTEIN - - 6 142 3.6E-14
NCBIfam TIGR01395 JCVI: flagellar basal body rod protein FlgC IPR006299 Flagellar basal-body rod protein FlgC 5 146 8.6E-49
Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal IPR010930 Flagellar basal-body/hook protein, C-terminal domain 78 144 2.0E-13
Pfam PF00460 Flagella basal body rod protein IPR001444 Flagellar basal body rod protein, N-terminal 7 34 6.2E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.