Pseudomonas syringae pv. tomato DC3000, PSPTO_1782
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCGGCAGTTTTTGCAATTGCTCGACCAAGCGCGGCAAATCGCCCAGGTGATCGCGCTCGATCTCGATCAGACGCAGGCCAACGGGGGCGTATTCGGTG AGCAGTGCGCGGATCAAGGACGACTTGCCGGTGCCGCGCGAGCCCCACAGCAACGCATGGTTGGCGGGCAGGCCATTAATGAACTGGCGCGTGTTGCGCC CCAACTGGTCACGCTGCAGGTCGACGCCGATCAGGTCGGTCAGCCGCGTCTCCAGGCTGACCTCCAGCGGCATCAGATAGCCGCTACGGCCTTCACGCAC CCAGCGAGCCGCCAGCGCCTGTGACCAGTCGACCGGCTCACGCAGCGCTGGCAGCAACGGTTCGAGCCGAGCCAGTACGGCATCGGCACGCTGCAAAAAA GCATCCAACCGAGAATCCACGGGATCTCCTCATATTTAACTGATTAATCACCAGTGCCGATCAGCTATGCTTGGCGCAGCAGAAGTGGCAGTAGGTACTC
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| DNA Sequence for Gene |
>PSPTO_1782
ATGGATATATCGCTCAAAAACAGGCTTTCGTTCAAGCAGGCACGCCTTGCCGTACTGATCGGCTTTGCGCTTGGCACCCTGTTGAGCGTGGCGCAGATTG CGATCGATTATGCCAGCGAAGACGCCTCCATCAATCGCGAAATCGGATCACTGCTGGAAATCATCCAGAACCCGGCCTCGCGTATCGCCTACAACATCGA CGCCGAACTCGCCCAGGAGCTCACCCTTGGGCTGTTGCACTCCCCTGCCGTGGTCAGTGCCAGGCTGACCGACAACAACGACACGGTGCTCGCCAGCGTC GAACGAGCGACTGCGACCGGGCGTTACCGGGTGCTCAGTGACTGGCTGTTCGGCGAAAGCCGGCAGTTTCAGGAGAAGCTGCACCTTGACCACCTGCCAG ACGAAACCATCGGCACACTGTACCTGACCGTGGACACCTTCGCGTTCGGCAGCCACTTTCTGCAACGCGCCGAGATCACCCTGCTCAATGGCTTTGTCCG CAGTCTGGCGCTGGCTGGCATTCTGACCATTCTGTTCTACGCAACCCTGACCAAGCCGCTGGTGAGGGTCATCCGCGACTTGAGCAGCCGCGACCCACGC ACTGTCGATCAGGCGAAAATCACCTGCCCGCCGTATCACGAGAAGGACGAAATCGGCGTTCTGGTCGCCACGTTCAACCGCCAGTTCGAAACCATGAGCA GCGAATTTTCCAGGCGCCGCGCCGCCGAGGATCGGCTGACCGACCATCTCAACGAGCTGGAAAACATTGTTTCGGCGCGTACCAACGAGCTCAAGTCCAG CAACATGCGCCTGCGCGAGTCCAACGAAGAACTGCAGATCGCGCGCAGCACGGCACTGGACATGGCGAATGCACGCTCGGCGTTTCTGGCGCACATGAGT CATGAAATCCGCACGCCACTCAACGGTTTGCTGGGCATGCTGGCGCTGTCGCTTGACAGCCCGCTCGGGGCCGAGCAACGCCAGCAACTGATGATCGCCC ACGACTCGGGCAAGGTACTGGTCGAACTGCTCAACGATATTCTCGACATGTCCAAGTTCGACGCCGGCCATCTGGAGATCGAGCGCATTCCGTTCGACCT TGGGGGGCTGATCGAGGACACGGCCAATCTGCTCTCGCAGAATGCCGCGCCCAGCGTGGAACTGACCTGCCTGATTGCGCCGGATTTTCCGGCGATGGTC ACCGGCGACCCGACCCGGGTCCGGCAGATCGTCAGCAACCTGCTGTCCAACGCGCTCAAATTCACGCGTTTCGGGCGTGTCGATGTGCGCCTGACCCACC ATCAGGATGCGGCCAGCGGGGAACATCGCGTACGCATCGAGGTGCGCGACACCGGTATCGGCATCGCGCAGGATGCCCAGGCAAAAATATTCCAGCCGTT CACCCAGGCCGAAACCGCAATCACCCGCCAGTACGGCGGCACCGGGCTGGGCCTGGCGCTGACCAACAACCTTTGCGAGGCCATGCACGGCACATTGAGC ATCCAGTCGCAATCGGGTTTCGGCAGCCAGTTCTGCGCTGAACTGCCATTACCGGTGCACGTGCCTGCGGTTGCGCAGAACCCGCTCAGAGGCCGGGTAA CTGTGGTCAGCTCGGCCGGCAGCGGTCTTGTGGAATTGCTCGGCAGCCTGCTGCCCTTCTGGGGAGTGGACCTCAAGCGGCGCAGTATCGACGACAGCCC GGACGATCTGGACCTCGACAATGCTCCAGATCTGGTCATCACCGACTGCCCCGAGTGCCTGTTCGCGATTCGCCCGACCACGCCGGTGCCGATTTTGCTG GTCACGGCTTACGGCAATTTCATGCCGGGCGAACAGGTTGCAGCCCTTGCGCCATTGCAACAGCAGGCCCGGCCCTTGGCCCGCAACGCGCTGTACCACG CACTGCGACGCGTCCTGAACCAGGAAGACACCGGCAAGCGGGACACGCTGGCGCTCGATCAGCCGACCCGGCGTGTGGCCCGCGTCCTGCTCGTGGAAGA CAACCCGGTCAATCAACTGGTGGCCAAAGGCATACTGAGCAAGCTCGGCTGCGAAGTGATCATCAGCAGTCACGGTGGGGAGGCGCTGGAACAACTGGAG CACGGCCATTTCGACCTGGTGTTGATGGACTGCAACATGCCGGTCATGGACGGCTACCAGGCCACCCGCCAGATCCGCAGCAGCGGCCGCTGGCCCAATC TGCCGATCGTTGCGCTGACCGCCAACGCCATGCCCGACGAGCGTGAACGCTGCAAGGCGGCCGGCATGAACGACTACCTGGCCAAGCCGTTCCGACGCGC TGAACTGGCCGGCATTCTGGATCAATGGATCCCCGTCACTGACGACCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGATTTAACGCAGCAGCGCTTCAATTTCATCCGTCAGTTCTTCAGGCTTGGTCAATGGCGCAAAACGCTTGACCAGCTTGCCGTCCTGACCAATCAGGA ACTTGGTGAAATTCCACTTGATGCGCTCGGTGCCCAGCAGCCCCGGCGCCTGCTCCTTGAGCTGAACGAACAAGGGATGGGCCTGATCACCGTTGACATC GACTTTCTTGAACAGCGGGAAGCTGACGCCGTAGTTCAGTTCGCAAAAACCGGAAATAGCGCCCTCGTCTCCCGGCTCCTGCTTGCCGAACTGGTTGCAC GGAAAGCCGAGCACCACCAACCCCTGATCCTTGTAGTCCTGCCAGAGTTTTTCCAGCCCTTTGTATTGGGGCGTGAAACCGCATTTGCTGGCCGTATTGA CCACCAGGACCGCCTTGCCAGCGAAATCGGCGAGGGTTTTCTGTTCTCCCTTGATCGTCGTGACCGGGATGTTCAGCAGGTTTTCGCTCATCAAAAGAAG
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| Amino Acid Sequence |
>sensor histidine kinase/response regulator
MDISLKNRLSFKQARLAVLIGFALGTLLSVAQIAIDYASEDASINREIGSLLEIIQNPASRIAYNIDAELAQELTLGLLHSPAVVSARLTDNNDTVLASV ERATATGRYRVLSDWLFGESRQFQEKLHLDHLPDETIGTLYLTVDTFAFGSHFLQRAEITLLNGFVRSLALAGILTILFYATLTKPLVRVIRDLSSRDPR TVDQAKITCPPYHEKDEIGVLVATFNRQFETMSSEFSRRRAAEDRLTDHLNELENIVSARTNELKSSNMRLRESNEELQIARSTALDMANARSAFLAHMS HEIRTPLNGLLGMLALSLDSPLGAEQRQQLMIAHDSGKVLVELLNDILDMSKFDAGHLEIERIPFDLGGLIEDTANLLSQNAAPSVELTCLIAPDFPAMV TGDPTRVRQIVSNLLSNALKFTRFGRVDVRLTHHQDAASGEHRVRIEVRDTGIGIAQDAQAKIFQPFTQAETAITRQYGGTGLGLALTNNLCEAMHGTLS IQSQSGFGSQFCAELPLPVHVPAVAQNPLRGRVTVVSSAGSGLVELLGSLLPFWGVDLKRRSIDDSPDDLDLDNAPDLVITDCPECLFAIRPTTPVPILL VTAYGNFMPGEQVAALAPLQQQARPLARNALYHALRRVLNQEDTGKRDTLALDQPTRRVARVLLVEDNPVNQLVAKGILSKLGCEVIISSHGGEALEQLE HGHFDLVLMDCNMPVMDGYQATRQIRSSGRWPNLPIVALTANAMPDERERCKAAGMNDYLAKPFRRAELAGILDQWIPVTDDR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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