Pseudomonas syringae pv. tomato DC3000, PSPTO_1745 (gyrA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATCATTGAAGAACGCGACGGCCGCGAACTGCTTGAAGTCGGCGGTCAGCGGGTGGGCGCCGATGTAGAGGCCTTCAATCCGGTGTTCGATGTGACGCCGG CAGACCTGATCGACGCCATCGTGACTGAAAAAGGCATCGTCGAGCGTCCCGACACCGCCCGCATGGCGCAGTTGATGAGCCGCAAACACCTTCATTGACC TACGCTGTGCACGCGCAGCCGCTTGGCCAAAGCGGCTGCGCGGGCCTGTAAGCGTCTCTCAGGCGGTTGTGCGCAGGTGGCTCGTTTTCAGCGCCTGCAA AGGATGTGAGCGCCCCGGCGGTTGTGGTAATATCCGGCGGTTATCGGGGACACTCACTGGCGTCACCCACACTGCGCAGTTTCATGGCATAACTCGTTGA TTTGTCGTAAGTCGCTGCCCTGCAAATGCTGGCAGCGGCGAGCTTCGTATACCCCGAATGGGTTTGCGAGGTTTCACCAGAAAAAGGAATCAGGCTTCTC
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| DNA Sequence for Gene |
>PSPTO_1745
|gyrA
ATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTGAAGCAGTCCTACCTCGACTACGCAATGAGCGTAATCGTCGGTCGGGCAC TGCCCGATGCGCGCGACGGCTTGAAGCCCGTGCACCGGCGCGTGTTGTTCGCAATGAGCGAGCTGGGTAACGACTGGAACAAGCCGTACAAGAAATCCGC CCGTGTGGTTGGTGACGTGATCGGTAAGTATCACCCACACGGCGACACCGCCGTGTACGACACCATCGTTCGTATGGCTCAGCCATTCTCGCTGCGCTAC CTGCTGGTAGACGGCCAGGGCAACTTCGGTTCGGTCGACGGCGACAACGCGGCGGCCATGCGATACACCGAAGTGCGCATGACCAAGCTGGCTCACGAGC TGCTGGCCGACCTGCACAAAGAGACCGTCGACTGGGTGCCGAACTACGACGGCACCGAAATGATCCCTGCGGTCATGCCGACCCGTATTCCCAACCTGCT GGTCAACGGCTCGAGCGGTATCGCCGTGGGCATGGCGACCAACATTCCGCCGCACAACCTCGGTGAAGTCATCGACGGTTGCCTGGCGCTGATCGACAAC CCCGAGTTGACGATCGACGAACTGATGCAGTACATCCCCGGCCCGGACTTCCCGACGGCGGCGATCATCAACGGCCGCGCCGGCATCATCGAAGCCTACC GCACCGGCCGCGGGCGCATTTACATGCGTGCCCGCTCCATCGTCGAAGACATCGACAAGGTCGGCGGTCGCCAGCAGATCGTCATCACCGAGCTGCCTTA CCAGTTGAACAAGGCGCGTCTGATCGAAAAGATCGCCGAGCTGGTCAAGGAAAAGAAACTCGAAGGCATCACCGAACTGCGCGACGAGTCCGACAAGGAC GGTATGCGCGTGGTCATCGAGCTGCGTCGTGGCGAAGTGCCTGAGGTTGTGCTCAACAACCTGTATGCCCAGACCCAGCTGCAAAGCGTTTTCGGTATCA ACATCGTTGCCCTGATCGACGGTCGTCCGCGCATCCTGAACCTCAAGGACCTGCTGGAAGCCTTCGTGCGTCACCGCCGCGAAGTGGTCACCCGCCGTAC CGTGTTCGAACTGCGCAAGGCGCGCGAGCGTGGCCACATCCTTGAAGGTCAGGCGGTTGCGCTGTCCAACATCGATCCGGTCATTGCCCTGATCAAGGCG TCCCCGACACCTGCCGAAGCCAAGGAGGCGCTGATCAAGACGCCTTGGGAATCGAGCGCAGTGGTCGAGATGGTCGAGCGCGCCGGTGCCGATTCGTGCC GCCCCGAGAACCTCGACCCGCAATACGGCCTGCGTGAAGGCAAGTATTTCCTGTCGCCAGAACAGGCTCAGGCCATTCTGGAACTGCGTCTGCACCGCCT GACCGGTCTGGAACACGAAAAACTGCTGGGTGAGTACCAGGAAATCCTGGCTCAGATCGGCGAGCTGATCCGCATCCTCAACAGCGCCACGCGCCTGATG GAAGTGATCCGCGAAGAGCTCGAACTGATCCGCGCCGAATACGGCGATGCGCGTCGCACCGAGATTCTCGATGCACGCCTGGACCTCACCCTCGGTGACC TGATCACCGAAGAAGAGCGCGTGGTCACCATCTCCCACGGCGGCTATGCCAAGACCCAGCCATTGGCTGTCTACCAGGCTCAGCGTCGCGGCGGCAAGGG CAAGTCGGCCACCGGCATCAAGGATGAGGACTACATCGCTCACCTGCTGGTCGCCAACAGCCACACCACGCTGTTGATGTTCTCCAGCAAGGGCAAGGTG TACTGGCTCAAGACCTACGAGATCCCGGAAGCGTCCCGCGCTGCCCGTGGTCGTCCGCTGGTCAACCTGCTGCCGCTGAGCGAAGGTGAATACATCACCA CCATGCTGCCGGTCGATCTCGAAGCCATGCGCAAGCGTGCCGACGAAGAAGGCGAAGCCCTCGAAGGCGAGCTGGACGACGCGGAAAACAGCAGCGAGAC CGAAGAAGAGCGCAAGGCGCGCATCAAGGCTGCCGACAAGAAGAAGGCGCCGTTCATCTTCATGTCCACGGCCAACGGCACGGTCAAGAAGACTCCGCTG GTGGCCTTCAGTCGTCAGCGTAGCGTCGGCCTGATCGCGCTGGAACTCGACGAAGGTGACATCCTGATTTCCGCAGCCATCACCGATGGCGAGCAGGAAA TCATGCTGTTCTCCGACGGCGGCAAGGTCACCCGCTTCAAGGAATCCGACGTTCGCGCCATGGGCCGTACGGCTCGCGGTGTGCGTGGCATGCGTCTGCC AGAAGGGCAGAAGCTGATTTCAATGCTGATCCCGGAAGAAGGCAGCCAGATCCTCACCGCTTCCGAGCGTGGTTTCGGCAAGCGTACCGCCATTTCCGAG TTCCCTGAGTACAAGCGTGGCGGTCAGGGCGTTATCGCCATGGTCAGCAACGAGCGTAACGGCCGTCTGGTCGGCGCGGTTCAGGTGCTGGATGGTGAGG AAATCATGCTGATTTCCGACCAGGGCACACTGGTTCGTACCCGCGTCGGCGAAGTCTCCAGCCTGGGTCGTAACACCCAGGGCGTGACCCTGATCAAGCT GGCCAGCGACGAAAAACTGGTCGGCCTGGAACGCGTTCAGGAGCCCTCGGAAGTCGAAGGCGAAGAGCTTGAGGGTGACGAGGTTGTTGATGGCGTGATC GTTGATGTGGACGGCGCCGACGCAGACGAGGCAGGTGAAGACCTGCAGGCGGACGCGGCCCCGGACGACGACGAACCGCAGAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCAACGTAAATCAGGTAAGGGCTGGCTCGTCTGGAGGTGCATGTGCATCCAGGCAAGTCCAGCCCTTGCGACATTCGGCCGCCCCGCAGCCGGATCA GTATTTCCCGTCGCGAGCTGCCCGCTCGTGATGCAGCACCCGGTAACACGCGCGTACAGACCCAACGTATTTGACGAGAGTGGATATGAGCAAGCGAGCC TTTAACTTCTGCGCAGGTCCTGCTGCGCTTCCTGAAGCTGTTCTGCTGCGTGCCCAGGCGGAACTCCTCGACTGGCACGGCAAAGGCCTGTCGGTCATGG AGATGAGCCACCGCAGTGATGAGTTCGTCTCCATCGCCAACAAGGCTGAGCAGGATCTTCGCGACCTGTTGTCCATTCCCTCCAATTACAAAGTGCTGTT CCTGCAAGGCGGCGCCAGCCAGCAGTTTGCGCAGATCGCGCTGAACCTGCTGCCTGAAAACGGCAAGGCCGATTACATCGACACCGGCATCTGGTCGCAG
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| Amino Acid Sequence |
>DNA gyrase subunit A
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY LLVDGQGNFGSVDGDNAAAMRYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALIDN PELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRIYMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRREVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKA SPTPAEAKEALIKTPWESSAVVEMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLGEYQEILAQIGELIRILNSATRLM EVIREELELIRAEYGDARRTEILDARLDLTLGDLITEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFSSKGKV YWLKTYEIPEASRAARGRPLVNLLPLSEGEYITTMLPVDLEAMRKRADEEGEALEGELDDAENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPL VAFSRQRSVGLIALELDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQILTASERGFGKRTAISE FPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERVQEPSEVEGEELEGDEVVDGVI VDVDGADADEAGEDLQADAAPDDDEPQN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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