Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TTTCTCCGAAAAGGTTGCAAGATAAAGGCTGAACTACGCCAATCCGGCAAGCTTTCTGATGGCCTTTACTGTTCCAAGCGGCAAGTCTTTCTTGGGATGC GGCACCGGAACTGTTTGAGACTTTTCTGGGTGTTTGAACATATGGTGACTGCCGGTGACACGATCAAGAACCCAACCATCTGCTTCAAGCTCCTTTACCA ATTGCCTGCTTTGCACCTCCACCTCCTTGCCAATCGATACAAAAATATAACCCTGGACGCATATTAAAACAATGTAGAAAAGTGTTCCCAGGGTTATGTT TTTTATTTCGTTACACCACGCTTCACGAAAACCCATGGTTGTTCCTTACTGCTGGCTGTCGGGCCAGCTGATGCGAACTCGACAACTGTACTTGCCTGCT TATAACTTTTTGATCTAAAACTACCCTGTCCTCACTGGGTCAGTTTCTGGGTGACTGCACTTTCTCAGTCACCTCCCCAACGGAAACCCGGTAAGGACTT
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DNA Sequence for Gene |
>PSPTO_1633
|asnB
ATGTGCGGATTAGCAGGTGAACTTCGTTTCGACCATCAACCAGCGGACCTCGCCGCAGTTGAGCGTATTACCCATGAGCTGGCGCCTCGCGGCCCGGATG CGTGGGGGTTTCATAGCCAGGGGCCGATTGCCCTTGGTCACCGCCGTCTGAAAATCATGGACCTGTCGGATGGCTCGGCGCAGCCGATGATCGACAGCAA CCTTGGCCTGTCGATGGCCTTCAACGGTGCGATCTACAACTTCCCCGAATTGCGTGCCGAGTTGGAAAGCCTTGGCTATCAGTTCCATTCCGGTGGCGAC ACCGAGGTATTGCTCAAGGGCTACCACGCGTGGGGCGCAGAGATGCTGCCCAAGCTCAATGGCATGTTTGCCTTTGCCATCTGGGAGCGCGACAGCAAGC AGCTGTTCATTGCCCGTGACCGCCTCGGTGTAAAGCCGTTGTACCTGTCGAAAACCGATAAGCGCCTGCGCTTCGCGTCCTCGCTGCCTGCCCTGCTCAA GGGCGGTGATATCAGCGGGATGCTTGATCCGGTGGCGCTCAATCATTACCTCAACTTCCATGCTGTGGTGCCTGCACCGCGTACGCTGCTGGCCGGCGTC GAGAAGTTGCCGCCTGCCAGCTGGATGCGCATTGACGCCAGCGGCAAGGTCGAGCAGAAAGTCTGGTGGACCCTGCCTTATGGTCCCCACGAGGACGAGA AAAATCTCACTCTGGAAGACTGGCGCGACCGTGTACTGGACAGCACCCGCGAAGCGGTGGCCATTCGTCAGCGTGCTGCGGTAGACGTAGGCGTGCTGCT TTCGGGCGGTGTCGATTCGAGCATGCTGGTCGGCCTGCTACGCGAAGTGGGTGTCGAGGACCTGTCAACCTTCTCCATCGGCTTCCAGGATGCTGGCGGC GAACGTGGCGATGAATTTCAATATTCGGACCTGATCGCCAAGCATTACGGTACGCGTCACCATCAGTTGCGCATTCAGGAAAGCGAGATCATCGAGCAGT TGCCTGCGGCGTTCCGCGCCATGAGCGAACCAATGGTCAGCCACGACTGCATCGCCTTTTATCTGCTGTCGCGCGAAGTGGCCAAGCACTGCAAGGTCGT GCAGAGCGGCCAGGGCGCTGACGAGCTGTTTGCCGGTTATCACTGGTACCCGCAAGTCGATGGCGCAAGCGACCCGGTCGCGGCCTACCGTTACGCCTTT GTGGACCGCAGCTACGCCGAATACGCGGACACTGTTCAGCCAAAATGGCGCACCGCCAACGATGCAGCCGGTGACTTCGTTCGCGATCACTTCGCCCAGC CGGGTGCCAGCGCTGCGGTTGACAAGGCGCTGCGTCTGGACAGCACAGTGATGCTGGTCGATGACCCGGTCAAACGTGTCGACAACATGACCATGGCCTG GGGCCTGGAAGCGCGCACGCCGTTTCTCGACTATCGTCTGGTCGAGCTGTCGGCGCGTATTCCGGGCAAGTTCAAGCTGCCCGATGGCGGCAAGCAAGTG CTGAAAGAAGCGGCGCGGCTGGTCATTCCATCAGAAGTGATCGACCGCAAGAAGGGCTATTTCCCTGTGCCCGGCCTCAAGCATTTGCAGGGCGATACAC TCAATTGGGTACGTGAACTGCTGACCGATCCGAGCCAGGACCGCGGCCTGTTCAACCCGACCATGGTCGACAAGCTGCTGACCAATCCCGAAGGCCAGCT CACGCCGCTGCGCGGCTCCAAGTTGTGGCAGTTGGCCGCGCTGAACCTGTGGCTCAGCGAACAAGGACTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTGATGAAACAGAACGCGACGACTTATAGCCAACGCCTGTTGCGCGGACAGTCGCCCTCGTATGAACGCCTGCAAGCGCGCCTAGCCGAAGATGGCAGCC AGATCGATGCAGAGCCGTTGGCCCTGCATTGTGGCTGGGGTCGCCTGCTGATCGGTCATACGTATCCTGACCCGGCAGCGCTGGCGCAGGACCTGCTTAA CGAGAAAGCCGGCGAACGCGACATTGCCTTGTATGTGGCCGCGCCACAGCAGGTGCTGGCGCAAGCGCCGCAACAGTTGTTTCTCGACCCGTCGGACACG TTGCGTCTGTGGTTCAGCGACTACCGTCCGGCGCAGCGCGTGTTCCGCGGTTATCGTATCCGCCGGGCGCACAACGAAACCGACTGGCAGGCCATCAATA ACCTGTACCTGGCACGCGGCATGTTGCCCATCGACCCTGCCCTGCTCACCCCGCGTCATCAGGGCGGCCCGGTGTACTGGGTGGCCGAGGACGAAGGCAG
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Amino Acid Sequence |
>asparagine synthetase
MCGLAGELRFDHQPADLAAVERITHELAPRGPDAWGFHSQGPIALGHRRLKIMDLSDGSAQPMIDSNLGLSMAFNGAIYNFPELRAELESLGYQFHSGGD TEVLLKGYHAWGAEMLPKLNGMFAFAIWERDSKQLFIARDRLGVKPLYLSKTDKRLRFASSLPALLKGGDISGMLDPVALNHYLNFHAVVPAPRTLLAGV EKLPPASWMRIDASGKVEQKVWWTLPYGPHEDEKNLTLEDWRDRVLDSTREAVAIRQRAAVDVGVLLSGGVDSSMLVGLLREVGVEDLSTFSIGFQDAGG ERGDEFQYSDLIAKHYGTRHHQLRIQESEIIEQLPAAFRAMSEPMVSHDCIAFYLLSREVAKHCKVVQSGQGADELFAGYHWYPQVDGASDPVAAYRYAF VDRSYAEYADTVQPKWRTANDAAGDFVRDHFAQPGASAAVDKALRLDSTVMLVDDPVKRVDNMTMAWGLEARTPFLDYRLVELSARIPGKFKLPDGGKQV LKEAARLVIPSEVIDRKKGYFPVPGLKHLQGDTLNWVRELLTDPSQDRGLFNPTMVDKLLTNPEGQLTPLRGSKLWQLAALNLWLSEQGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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