Pseudomonas syringae pv. tomato DC3000, PSPTO_1524
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACACCGCATGCACGACGCAATCAGGGTTGATCGCCCGGATGCGCTCGGCCATCACCTCGACCTTGGGCCGCCCCACGGTCGTGTCCAGCGCGTGTAGCT GGCGGTTGCTGTTGCTGACACAGACGTCGTCCATGTCGAACAGCGAAATCTCGCCAACGCCACTGCGCGCCATGGCTTCCGCCGCCCACGAGCCCACGCC GCCGATGCCAACGATCGCTACATGAGCCGCGCGCAGGCGTGCCAGCCCCTCAATGCCGTATAAACGGGCGATGCCTGCGAAACGTGGATCGTCTGTGCTC ATGATCAATACCCCGAAAACCGGCGCGCATTATAGGGGGTTGTCGAGGGTTAGGACACCCGGCTTGTTACCCGGTCGCGATCAGCGCTGAGGGTGCAAAA AACCTTTGTTTAGCAGCGAAAACGCAGAAAAGAGTCTAAGTGCCGACCACACCTGGTACCTCGATGCCGCTAGGGTTAATAGACGCGACAGGAAGTCGCG
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| DNA Sequence for Gene |
>PSPTO_1524
ATGTCGATATACCGCATGGAGCACAGTTTAGACATGAATAAAAAAATATCAGACGCTCCAATCTGGCCGGTCAACTCATTCAAATCCGTCGTGACCAAAG TCCCGGACTGGCCTGACAGCATCTCGGGCCTTGCCTATAACCCCTTTCGTCCCGGACAAAGTCCCTACAAGCACATCTATCCGACCCGCGAGCAAATCAA AGAAGACTTGCTGCTGATCCGCCCGTTGACTCGACATGTAAGAACCTACTCGGTCGAGCAGACGCTGGCCTGTATTCCCGAAATAGCCGAAGAACTCGGC ATGAGTGTCACACTCGGCATATGGATAGGCTGGGACGAAAAACGCAATGATCGGGAACTGATCGAGGGCGTGAAGCTTGCCAATCAGTATCCCAGCGTCC GGCGTCTGATCATCGGAAATGAAACATTACTGCGCAATGACGTCACCGTCAGCCAACTGATCGATTACATGCAAACGGCACGACAAGGTGTCAACGTTCC GATTTCAACCTCAGAGGGATGGCAACAGTGGCACGATACGCCGGAACTGGCTGATCACGCAGACTTCATCGCGGCGCATGTCTTGCCATTCAGGGAGTTC GTTCCAGTCACCCAGGCAGGCTCTGCAGTTCTCGCACGGGCGAACGAATTGAGGCTGATGTTTCCCGAAAAACCGCTGATACTTTCCGAGATTGGCTGGC CAGACAAAGGCAACTTCAGAAGACGCACCACCGCCTACGTCGCCGAACAGTCAATTTACCTGCGCAGCCAGCTCGCGCTGTTGAACCAGAGTGGCCTCGA CTACTTTGTCAGGGAGGCATTTGATCAACAATGGAAAACTGAGGAAGGGTTGCCGGGGCCTCACTGGGGCCTGTTCGATGCCCAGCGAAAGATAAAGTTA CCACTGCAAGGCCCAGTGAAAATACGGGCCAGCTGGCGATCAGAAGTTCCGAGATTGGTCGCCGATTGGCAGCCCGACAACTGGCGAACAACCGTATTGA TTTTTGCTGCGTTGTACACATTATTGGTAGGCGTTGGCATAAGTTACGCACAGCCCTTATCGATGTGGGTGGCTTTGCCCATCGCCTTGGTGTGGGTGAC CAGCTTACTGATCGGCACGGGGATACAGGGTTACGAGTTCCTCGAATCATGCTGGGGACCGGAGAAACCGCGATCTTTTCCTCCGTTAAGAGCTTACCCG GGGCCGTTACCCAAAGTGTCCATACACGTACCGTGCTACAACGAACCTCCCGACATGGTGAAGCTGACGCTCGACGCATTACAACGCCTGGACTATCCGA ACTTTGAGGTTCTGATCATCGACAACAACACTCAAGACCCGGAAGTCTGGGAGCCCATTGAGCAGTACTGCAGGCAACTGGGACCTCGCTTCCGGCTCTT TCATGTCAATCCACTTAGCGGGTTCAAGTCGGGCGCACTGAACTACCTGCTGGACTACACCGCCAAGGATGCCGAAATAGTAGCGGCGATCGATGCTGAT TATTGCGTGCACCGGCATTGGCTCAAGCATATGGCCCCCTATTTTGCGTGCCCGGATATAGCGGTTATCCAAGTACCGCAAGACTACCGTGATGGCGACG ACAGCCTGTTCAAACGTTGCTGCCAGGCCGAGTATCGCGTTTTTTTCAATATTGGCATGGTCATCCGCAACGACCACGACGCAATCATTCAGCACGGCAC CATGACCCTGATTCGCAATTCGGTGTTGCAGCGACTGCGCTGGGCAGAATGGAGCATCTGCGAAGATGCCGAGCTCGGACTGCGGATACTGGAGAACGGT TTTTCCACCGGCTATGTCGCCATCAGCTATGGCAAGGGACTGATCCCGGATACATTCATGGACTTCAAGAAACAACGGTATCGCTGGGCTTACGGTGTCA TCCAGATACTCAAACGACATACTGGAAGCCTGATCGCAGGTACGTGCGAGGCCTTGACGCCAATACAGCGCTATCACTTCATTGCCGGCTGGATGCCTTG GATTGCAGGGGGAATAAATTACTTTCTGGCTATCGCTGTGCTTCTCTGGTCAATGGCAATGATCATTCAACCCGACACACTCGAACCTGTGCCGTGGATA TTTTCATCCTCATTACTGTTGATGTTTGTTCTGGGCGTTTGCAAAGCGATCAGCCTTTATCAACGATTGGCCAGCACCGACATCAAAGACGCCTTCGCAG CCATAATTGCGAGCATGGCGCTGTACTCGGTTGTAGGCAAGGCCGTGCTTTCATCGGCATTCACCTCAGGATTACCGTTCTTTCGCACTCCCAAGCAGAC CTCTGGCAGCGGGCTCGGCAAGGCCCTGCTGGACGTCCGGGAAGATCTGTACATGGCCGTGGTCTGGTGGGTCATGACGGTATCGCTGTGCTTCCGAAAA GAAGCTATCGGTCCGGACCTTGGATTCTGGGTGGCGATAATGTTCGCCCAGTCATTGCCTTACGTAGCCGCCATGATCATGGCAATACTGTCGGCTCTCG CAAACCGCCCTTCACGCTCCACAACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CATATCCACAGGGCACGATAAACGACGGCCCCAGGTCATCATTTTGCTTTAAGATATCCGCCTTTTCGCGCCCAAAGTCTTGCTACCGGAGTTCTGTACA TGACGGCCCCCGCCGACCTCTCGCCTACCCTCCAACTTGCCTGCGACCTGATCCGCCGACCATCGGTCACGCCGGTCGATGCCGATTGCCAGACGGTGAT GATGCAGCGCCTGGGCGATGCCGGCTTCAAGCTTGAGCCGATGCGCATCGAAGACGTCGATAATTTCTGGGCCACTCACGGCACCCGCGAAGGGCCGGTA CTGTGTTTCGCCGGTCACACCGATGTGGTGCCGACCGGACCGGTGCAGGACTGGCAGAATGATCCGTTCGATGCCCTGATCGACGAGCACGGCATGCTCT GCGGACGTGGCGCTGCAGATATGAAAGGCAGCCTGGCGGCAATGCTGGTCGCAGCCGAGCGCTTCGTGGCAGACCACCCGGACCACAAGGGTTCGGTGGC
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| Amino Acid Sequence |
>glycosyl transferase family protein
MSIYRMEHSLDMNKKISDAPIWPVNSFKSVVTKVPDWPDSISGLAYNPFRPGQSPYKHIYPTREQIKEDLLLIRPLTRHVRTYSVEQTLACIPEIAEELG MSVTLGIWIGWDEKRNDRELIEGVKLANQYPSVRRLIIGNETLLRNDVTVSQLIDYMQTARQGVNVPISTSEGWQQWHDTPELADHADFIAAHVLPFREF VPVTQAGSAVLARANELRLMFPEKPLILSEIGWPDKGNFRRRTTAYVAEQSIYLRSQLALLNQSGLDYFVREAFDQQWKTEEGLPGPHWGLFDAQRKIKL PLQGPVKIRASWRSEVPRLVADWQPDNWRTTVLIFAALYTLLVGVGISYAQPLSMWVALPIALVWVTSLLIGTGIQGYEFLESCWGPEKPRSFPPLRAYP GPLPKVSIHVPCYNEPPDMVKLTLDALQRLDYPNFEVLIIDNNTQDPEVWEPIEQYCRQLGPRFRLFHVNPLSGFKSGALNYLLDYTAKDAEIVAAIDAD YCVHRHWLKHMAPYFACPDIAVIQVPQDYRDGDDSLFKRCCQAEYRVFFNIGMVIRNDHDAIIQHGTMTLIRNSVLQRLRWAEWSICEDAELGLRILENG FSTGYVAISYGKGLIPDTFMDFKKQRYRWAYGVIQILKRHTGSLIAGTCEALTPIQRYHFIAGWMPWIAGGINYFLAIAVLLWSMAMIIQPDTLEPVPWI FSSSLLLMFVLGVCKAISLYQRLASTDIKDAFAAIIASMALYSVVGKAVLSSAFTSGLPFFRTPKQTSGSGLGKALLDVREDLYMAVVWWVMTVSLCFRK EAIGPDLGFWVAIMFAQSLPYVAAMIMAILSALANRPSRSTT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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