Pseudomonas syringae pv. tomato DC3000, PSPTO_1484

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1484
NCBI Old Locus Tag	PSPTO1484
Name	Synonym: PSPTO1484
Replicon	chromosome
Genomic location	1632745 - 1633371 (- strand)

Cross-References

RefSeq	NP_791310.1
GI	28868691
Entrez	1183121
INSDC	AAO55005.1
NCBI Locus Tag	PSPTO_1484
NCBI Old Locus Tag	PSPTO1484
UniParc	UPI000000880E
UniProtKB Acc	Q886U2
UniProtKB ID	Q886U2_PSESM
UniRef100	UniRef100_Q886U2
UniRef50	UniRef50_Q4KHP5
UniRef90	UniRef90_Q886U2

Product

Feature Type	CDS
Coding Frame	1
Product Name	LuxR family DNA-binding response regulator
Synonyms
Evidence for Translation
Charge (pH 7)	-1.31
Kyte-Doolittle Hydrophobicity Value	0.229
Molecular Weight (kDa)	22.4
Isoelectric Point (pI)	6.27

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 469 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001606 (736 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1484 Search term: LuxR family DNA-binding response regulator

Human Homologs

References