Pseudomonas syringae pv. tomato DC3000, PSPTO_1072
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd00616 | AHBA_syn | IPR000653 | DegT/DnrJ/EryC1/StrS aminotransferase | 26 | 363 | 2.08444E-124 |
| Gene3D | G3DSA:3.90.1150.10 | Aspartate Aminotransferase, domain 1 | IPR015422 | Pyridoxal phosphate-dependent transferase, small domain | 251 | 366 | 2.6E-33 |
| Gene3D | G3DSA:3.40.640.10 | - | IPR015421 | Pyridoxal phosphate-dependent transferase, major domain | 16 | 249 | 1.1E-72 |
| SUPERFAMILY | SSF53383 | PLP-dependent transferases | IPR015424 | Pyridoxal phosphate-dependent transferase | 26 | 368 | 6.72E-94 |
| Pfam | PF01041 | DegT/DnrJ/EryC1/StrS aminotransferase family | IPR000653 | DegT/DnrJ/EryC1/StrS aminotransferase | 25 | 363 | 6.0E-106 |
| PIRSF | PIRSF000390 | PLP_StrS | IPR000653 | DegT/DnrJ/EryC1/StrS aminotransferase | 11 | 371 | 3.5E-99 |
| PANTHER | PTHR30244 | TRANSAMINASE | IPR000653 | DegT/DnrJ/EryC1/StrS aminotransferase | 27 | 365 | 4.1E-89 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.