Pseudomonas syringae pv. tomato DC3000, PSPTO_0967
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCACACAGTCTGTTAGGCGTCTTTTTTTGTGCTCGCTCCAGCGTGGATTATCGTACCGACGCTCTGCCTCGCATGCAGTTCTGGACGCTTCGCGTCCGGT CTTGAGCTTGGGATGCCTGAGATTCAGGCTCGACTTGAGTCACCTTTTCGCCCCTCGGCGACCTACTTTGATGGGGCCAAAGTAGGCAAAGCCCCCCGCT CCGTTTCCGGCCCGACTTCGTCGGGTTCCTTCGCCCTGTCACTGATCCGGGGGTCGCCGCAACGGGCCATCCTTGGCCCGGTGCGGCTTGCTCGGCGTCC TGCCTCGCATCCCCCGGATCAGCGACAGGACTCAGCCGTCACTTACGTCGCACTCTGCGTCGTCAGTGCCATCGCGACAGAAAAGCGCTTTTTTATAGGC AGTGACGACGCACAGGGCATGGCGTTGTGTTGCAGCATAACGTGGCGACCCACCGCGTTTCGCTTGCCCACTCAAGCTAGCCACCCGTAACATCCCGCCC
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| DNA Sequence for Gene |
>PSPTO_0967
ATGAAAAAACCGGCCTATATCGGGCGCTTTGCGCCGACTCCCAGTGGTTATCTGCATTTTGGCTCGCTGGTCGCAGCGCTGGCGTCTTATCTGGATGCCC GTGCGGTGGGCGGTCAGTGGCTGTTGCGCATGGAAGACCTCGACCCTCCGCGCGAGGTGGCTGGCGCGCAAGTGGCGATTCTTGAAACACTCGAGCGCTA TGGCTTTGAATGGGACGGCGAGATGGTCCGGCAAAGCGAGCGCCATGACGCCTACGCCGATATTCTTCAACGCTGGTTCAATCATGGCCTGGCCTATGCC TGCACCTGCTCGCGCAAGCAGCTCGAGGCCTTTGAAGGCGTGTACCCCGGTTTCTGCCGCGATGCAGGGCATGCGGCGGAGAACGCTGCTATCCGCATTC GCGTGCCGGAGCTGGAGTATCGTTTCGAGGACCGGGTTCAGGGCACATTCCACATGCACCTTGGGCGCGAAAGCGGCGACTTTGTGATCCGCAGGCGCGA CGGTCTGTATGCCTATCAACTCGCCGTCGTCATCGATGACGCCTGGCAAGGTGTCACTGATATTGTGCGCGGTGCCGATCTGCTCGACTCCACCCCCCGC CACTTGTATCTGCAGGAATTGCTGGGCCTGCCCCAGCCGCGCTACCTGCATGTACCGTTGATTACCCAGCCGGACGGTCACAAGCTCGGTAAATCCTATC GCTCCCCGCCTTTGCCTGCCGATCAGGCGACACCGCTCCTGCTGCGGGCGCTGCGAGCACTGGGGCAACCGGTCGACGCGCACATGGCCGATGGCACCGC GCAAGAAGTGCTTGCCTGGGGTATCCGGCACTGGAATGCTTCGCTCATACCGCGACAGCGCACTATTGAAGAAGCCCGGATAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCAGAGCGGTCGCTGCAAACTGCGATGCAAGGATGCTTGCAGGTTGTCCGGCATCCGTTAACATGCCGCTCCTCATCTACCAGCGCAGGGAGACCAGAT GTACATTTACCGGTTGGTTTTGCTTCTGGTGGTAGGCATTTATCTGTTTTCTCCGGCCATCATGGACTGGTGGATCGACGCGACCGGCGCCTGGTATCGG CCCTACATGCTGTGGCTGATCCTGATCGTGGTGACTTTCATTCTGCAGAGCCAGCGAGATGCCGATGAGCTTTAGCCTGACGCAGATGCTGCTGGTCAGC GCCGCTTATCTGCTGGTGCTGTTCGGTGTGGCCTGGATCAGCGAGCGCGGGCTGATTCCGCGCTGGATCATTCGCCACCCTCTGACCTACACCCTGTCGC TCGGTGTATACGCCAGCGCTTGGGCGTTCTACGGCACGGTCGGTCTGGCCTACCAGTATGGCTACGGCTTTCTGTCCAGCTACCTCGGGGTTTCCGGGGC
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| Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) synthetase
MKKPAYIGRFAPTPSGYLHFGSLVAALASYLDARAVGGQWLLRMEDLDPPREVAGAQVAILETLERYGFEWDGEMVRQSERHDAYADILQRWFNHGLAYA CTCSRKQLEAFEGVYPGFCRDAGHAAENAAIRIRVPELEYRFEDRVQGTFHMHLGRESGDFVIRRRDGLYAYQLAVVIDDAWQGVTDIVRGADLLDSTPR HLYLQELLGLPQPRYLHVPLITQPDGHKLGKSYRSPPLPADQATPLLLRALRALGQPVDAHMADGTAQEVLAWGIRHWNASLIPRQRTIEEARIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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