Pseudomonas syringae pv. tomato DC3000, PSPTO_0569
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACGTGTCCTGGTACATCGACTCCCTGTAAAGCAAACAAGACAATTTGTATTTAAAATACAAACTGTATTGTAACGAGGCCCTACATATCGTATTGTTTG TCTGCACCTCATCTCGGGAGTGCCTACATGCAAACCACAGGGAGTCATGGAATGAACGAAATACTCGATCAACTTCGCAAAGAATTCGCCACGCCGTGCC CTTCGTTGAGCGCCGTCAGAGAGCGATATTTTTCGCACCTTTCGAATGATCGCAATCTGCTGCGCAAGATCAACGCGGGCCGTATCGCCTTGAAAGTCAG CCGCACAGGCGGCACTCGCCAGGGCCATCCGTTCGTCTATTTGCACGATCTGGCCAATTACCTGAGCGACATCGTGACCAACAGGGCCGCATGAGTTCAA AAAAGCGCCGCAGCCGAGTAAAAAGTCTCGGCTGACCTTTGCAGTCATGACAAATCTTGGTACGTTTCCGCTACAAAATAACAACAATCAGGATTCTTTC
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| DNA Sequence for Gene |
>PSPTO_0569
ATGACCAAGACATCAAGGTGCTGGCCCTTCGCGGCCTGCCTGCTATCGCTGGCCTGTGGCACCGCCACTGCGGGGCCCTATTCGACCATGGTGGTGTTCG GCGACAGCCTGGCAGATGCCGGACAGTTCCCGGACACCGCTGGCCCCAGAGGCTCCACGTTGCGCTTCACCAATCGCGTCGGCCCGACGTATCAGGATGG CAGCGGTGAAGTGTTCAACCTGAACTCATCGACGCTGATCGGCAGAATGCTCAATGTCTCGGCGGGTGATCTGGCAGCCTCCACCTCACCCGTCAACGCC GCGCTGGGGCAGGCGGATGGCAATAACTGGGCTGTCGGTGGTTACCGAACGGACCAGATCCTTGATTCGATCAACTCGCAATCCACCGTGGTCGATCCGA ACTCAGGCACGCTGTTGCGCAGCCGGACCGGATATTTGCCCGCCAACAGCTTTCGCGCCGACCCCAATGCGCTGTATTACCTGACCGGCGGCGGCAACGA CTTTCTGCAAGGTCGCGTGTTGAGCGCCAGCAGCGCGGGACAAGCCGCCAACCGCCTGGCTGACAGTGCACTGGCACTGCAACAGGCCGGCGCGCGCTAC ATCATGGTCTGGCTGTTACCGGACATCGGCCAGACGCCAGCCTTGAGCGGTACGCCTCTGGCGTCAGCGACATCAGCCCTCAGCGCCGTGTTCAATCAGC AACTGGTCAGCCGTCTGGCGCAGATAGATGCACAGGTCATCCCGCTCAACGTGCCACTGTTGATATCTGAAACGCTGGCGGCTCCCGCACGCTTCGGTTT CGACCCCAACGAGAATCTGGTCGCCACGTGCTTCAGTGGCGACAGTTGCAGAGAAAGTGCAGCCAACGGTCGGTCCAGCGCGACGCCTGATCCGAGCCGG GTGTTTTTCAATGACCGCGTCCACCCTACCGAAGCCGGGCAGCGACTGCTGGCCGACTACGCCTATTCGCTGCTCTCGGCCCCCTGGGAAATCAGCCTGC TGCCGGAAATGGCCAATGGCACGTTGCGCATGCATCAGGACGAACTGCGCGCGCAATGGCTCAGCGACTGGGGCAACTGGCAGGGTGTCGGCCAATGGCA GAGCATTATTGCGGCGGGTGGTCAGAAAATGGATTTCGACGCGCAGGACAGCTCAGCCAATGCTGACGGCCGGGGCTACAACCTGACCATTGGCGGCAGC TACCGTTTCGCCGAACACTGGCGCACGGGCGTCGTTGCGGGTGCTTATCGACAGAACCTTGAGGCCGGTGCCAGAGACTCGGACTACAAACTCAACAGCT ATATCGCTACGGCCTTTGTGCAATATCAGGCCAACCACTGGTGGGGCGACCTTGCGGTGTCAGGCGGCAAGCTGGATTACGAAAACGCCGAACGCAAGTT CGCGCTGGGCGTGAGCGAAGGTCAGGAAAAAGGCGACACCGACGGCGAGTTGTGGGCCGTCAGCGGGCGAGTCGGTTTTGACATCGCAGGGGCTGCCAGT CGCTGGCACCTGTCGCCTTTCGTCAGTGCCGACTATGCCCATATCGACGTGGATGGCTACTCGGAAAAAGGCAACCGCTCGACCGCGCTGACGTTCAGCG ATCAGACGCGCAAGTCGCGTCGTGCAGGCGTTGGTTTGCAGGGCAAATTCGAAGTGACGCCCACCACGCAACTGTGGGCAGAAGTCGCAAGGGAACGGGA GTTCGAGACCGATCAGCAGAACGTGACGATGGCCCTCAACAGCGTGCAGTCGGTCGATTTCACACTCGAAGGCTACACGCCGCAACGCGACCTGAACCGG GCGACTTTCGGCGTCAGCCAGAAACTCACCCAGGACCTGACGCTGCGCGGCAACTACAACTGGCGCAAGAACGACGACGTGACTCAGCAGGGGGTTAATG TGGCATTGAGTATGAGTTTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACAGCACGCTGAACCGTGCGGAACGACAACCTCACTATCGTGCGACGCTCCGCGTCGGCATGCCTTTCTGGACGCTCTGCGTCCTGTACTGATTCTGCGG TGCCGCGCAGATCTGTGACGCGGAGCGTCACCCATGGCTTTCCCACGCTGCAGCGTGAGGAACGATAATCCCAACTGTCGTGATGCTCTGCGTCTGCTTC AAGACGTAGAGCATCGTCTGCTCAACCCTCGGCAGTCTGCGAAGCCAAAGCCACGGCACGGAACATGGCGCGGCGTTTGTTGAGGGTTTCTTCCCACTCC AGTGCTGGCACCGAGTCGGCGACGATACCGCCGCCAGCCTGCACGTGCAGCTCACCGTTCTTGATCACCGCCGTACGAATTGCGATGGCGGTGTCCATGT TGCCGTTCCACGCCATGTACCCCACCGCCCCGCCGTAGACGCCACGCTTGACCGGCTCCAGCTCGTCGATGATTTCCATGGCGCGGATTTTCGGCGCACC
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| Amino Acid Sequence |
>autotransporting lipase, GDSL family
MTKTSRCWPFAACLLSLACGTATAGPYSTMVVFGDSLADAGQFPDTAGPRGSTLRFTNRVGPTYQDGSGEVFNLNSSTLIGRMLNVSAGDLAASTSPVNA ALGQADGNNWAVGGYRTDQILDSINSQSTVVDPNSGTLLRSRTGYLPANSFRADPNALYYLTGGGNDFLQGRVLSASSAGQAANRLADSALALQQAGARY IMVWLLPDIGQTPALSGTPLASATSALSAVFNQQLVSRLAQIDAQVIPLNVPLLISETLAAPARFGFDPNENLVATCFSGDSCRESAANGRSSATPDPSR VFFNDRVHPTEAGQRLLADYAYSLLSAPWEISLLPEMANGTLRMHQDELRAQWLSDWGNWQGVGQWQSIIAAGGQKMDFDAQDSSANADGRGYNLTIGGS YRFAEHWRTGVVAGAYRQNLEAGARDSDYKLNSYIATAFVQYQANHWWGDLAVSGGKLDYENAERKFALGVSEGQEKGDTDGELWAVSGRVGFDIAGAAS RWHLSPFVSADYAHIDVDGYSEKGNRSTALTFSDQTRKSRRAGVGLQGKFEVTPTTQLWAEVAREREFETDQQNVTMALNSVQSVDFTLEGYTPQRDLNR ATFGVSQKLTQDLTLRGNYNWRKNDDVTQQGVNVALSMSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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