Pseudomonas syringae pv. tomato DC3000, PSPTO_0563

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCGAAAAACACCTTCGTAGCCAATTTCATCGGCGAGAACAATCGACTCAACGGGCGTCTGGTCAGCCAGGACGGCGACCGCTGCGTGGTCGAGCTGGAG CGCGGCGAGAAAGTGCACGCACTGGCGATCAACGTCGGTCGGCCGGGTGGCCCGGTGACGCTGTCCATTCGCCCCGAACGCATCAACCTCAATGGCCGCA GCGAAAGCTGTGTGAACCGTTTCTCTGGTCGAGTGGCCGAGTTTATCTACCTCGGCGACCACGTCCGTGTGCGTCTGGAAGTTGCCGGCAAGACTGACTT CTTCGTCAAGCAGCCGATTGCCGAGCTGGACCCGACGCTGAGTGTGGGTGACGTTGTGCCGATCGGTTGGCAAGTCGAGCACGTGCGTGCGCTCGATCCC CTGCAGCAAGAGCATTGATCTGTACATAAAAGCAACAACAGAGGCGAATTGATCGCCCATCCCAATCGCTTACCAACACTGCTCGTGGAGAAAAGAATCT
DNA Sequence for Gene
>PSPTO_0563
ATGTTGAAGTCTTTGAAGTTCACCGCCATCACGTTGGGCCTGATGTGCGCCGCGCAAGCCATGGCCGCCACCGACCTGACCGTCATTTCCTTCGGCGGTG CCAACAAGGCCGCTCAGGAAAAAGCGTTCTATGCGCCGTGGGAAAAGGCCGGCAACGGCAAGATCATTGCCGGTGAGTACAACGGTGAAATGGCCAAGGT CAAAACCATGGTCGACACCAAGAGCGTTTCCTGGGACCTGGTAGAAGTTGAATCGCCGGAGCTGGCTCGCGGCTGCGATGAAGACATGTTCGAAGAGCTG GACCCGAAACTGCTCGGCAATGCCGCTGACTTCGTGCCTGGCGCCATCACCACCTGCGGTGCGGGCTTCTTCGTCTGGTCCACCGTGCTGGCCTACAACG CCGACAAGGTTGCCAGCGCGCCAAGCGGCTGGGTCGATTTCTGGGACACCAAGAAATTCCCTGGCAAGCGCGGCCTGCGCAAAGGCGCCAAATACACCCT GGAATTCGCGTTGATGGCCGACGGCGTTGCGCCGAAAGACGTCTACAAAGTGCTGGCCAGCAAAGACGGTCAGGACCGTGCGTTCAAGAAACTCGATGAG CTCAAGCCAAACATCCAGTGGTGGGAAGCCGGCGCACAGCCGCCGCAGTACCTCGCTTCCGGTGACGTGGTGATGAGCTCGGCCTACAACGGCCGTATCG CTGCCGTGCAGAAAGAAAGCAACCTGAAAGTGGTCTGGACCGGCGGCGTATACGACTTCGATGCCTGGGCGATTCCAAAGGGCTCGAAAAACGCCGATGC AGCAAAGAAATTCATCGCTTTCATGCTGAGCCCGGAGCAACAGAAAACTTACTCGCAGAACATCGCCTACGGCCCGGCCAACACCCAGGCGGTCAAGCTG CTGGATAAGGAAACGCTGCAGAACATGCCCACCACACCTGAGAACATCAAGGATCAGGTGCAGATGGACGTGGCGTTCTGGACCGACAACGGCGAATCCC TCGAGCAGCGTTTCACTGCCTGGGCTGCCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGTTTGCGTTGAGTCAGATCCGGGCGTTCCCTGCTGCAGGGAACGCCCCCTTGTTGAAAGATTTCGGAGTTCGCTATGGCCATCGCCGTGCCCTTGAC TGAAGGCGCCAGCCCCACCTTGAAGCAACGTCTCGCTCGCGCCGAGCGGGTCAACCGCTGGAAGGCTCAGGCATTGATCGCGCCGTTGGTGATTTTCCTG CTGTTGGTGTTTCTGGTGCCCATCGCCGCGCTGCTCTACAAGAGCGTTGGCAACCCCGAAGTTGTTACCGCGCTACCGACCACCGTGGTCGAGGTGCAGA AATGGGATGGTAAAGGGCTGCCGCCCGAGTCGGTCTATAAGGCGTTGAGCCTGGACCTGGCTGAAACGCGCAAGAATTCCACGCTGGGCGACCTGTCCAA GCGTTTGAACATGGAACTGGCCGGTTATCGCAGCCTGCTGAGCAAGACCGCTCGCGCGCTGCCGTTCAAGACCGAACCGGCCTCTTATAAAGAAGCGCTC
Amino Acid Sequence
>polyamine ABC transporter periplasmic polyamine-binding protein
MLKSLKFTAITLGLMCAAQAMAATDLTVISFGGANKAAQEKAFYAPWEKAGNGKIIAGEYNGEMAKVKTMVDTKSVSWDLVEVESPELARGCDEDMFEEL DPKLLGNAADFVPGAITTCGAGFFVWSTVLAYNADKVASAPSGWVDFWDTKKFPGKRGLRKGAKYTLEFALMADGVAPKDVYKVLASKDGQDRAFKKLDE LKPNIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKESNLKVVWTGGVYDFDAWAIPKGSKNADAAKKFIAFMLSPEQQKTYSQNIAYGPANTQAVKL LDKETLQNMPTTPENIKDQVQMDVAFWTDNGESLEQRFTAWAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site