Pseudomonas syringae pv. tomato DC3000, PSPTO_0553 (surA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCTGAAGCCGAACCCAACAAGATCGTCAACTTCGGCTATCGCTATCGCAATGACCAGATTCGTTACGACGAAAGTACAGGTCGCTGGATTGTGGGTGGT GGTGACTACGGTCGTCCGGGCGATCCCAACTACGTGAAGGACTACTACAAGATTCAGCAGCACGATTTCTCGGTCATCTGGCCAATCGTGCCGCAGTGGA GCCTGATCAGCCGCTGGCAGTATGACTACAACCGTGAACGCACCATCGAAGCTTTCGGCGGGTTCGAGTACGACAACTGCTGCTGGAAAATGCGTCTGGT CAACCGTTACTGGATCGACTACGACGAATTCAGCCAGGCAGCGCCTCAGAACGAGAAAGGCGACCGCGGCATATTCCTACAAATCGTGTTGAAGGGGCTT GGCGGTGTTACTGGCGCCAAAGTGGACAGCTTCCTCGACAAAGGCATCCAAGGTTATCGTGAACGTGAAGACCAAGCTTTCTGATTGTCTGCGCCCGCTG
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| DNA Sequence for Gene |
>PSPTO_0553
|surA
ATGCTGGGCGCGTTACTCCTGAGCGGCGCAGTACATGCAGCGGTTCAACCTCTGGACAGTGTCGTGGCCATCGTCGACAACGACGTGATCATGAAAAGCC AGATGGACCAGCGTGTTCGTGAAGTTCAGCAAACCATCGCCAAACGTGGCTCTGGCGTGCCTCCTGCAGCCGATCTGCAACCGCAGGTTCTGGATCGTCT GATTCTGGAAAACCTGCAGTTGCAGATGGGCGAACGGTCCGGCATTCGTGTTTCCGATGACGAGCTGAACCAGGCGATCGGCACCATTGCCCAGCGTAAC AACATGAGCGTGGAGCAGTTCCGCGCCGCGCTGGCGCATGACGGCTTGTCTTATGAAGACGCTCGCGAGCAGGTTCGCCGGGAAATGATCATCAGCCGGG TGCGTCAGCGCCGGGTGGCCGAACGTATCCAGGTGTCCGAGCAGGAAGTGAAGAACTTCCTCGCCTCCGATCAGGGCAAGGCTCAGTTGTCTGAAGAGTT TCACCTGGCCAACATCCTGATCGCCACGCCTGACAGCGCTTCTTCGGATGCAATTCAGGCCGCAGCCGTCAAGGCCAAGAGCATTTATGACCAGCTGAAG AAAGGTGCGGACTTCGCCAAGATCGCCGCCACCACGTCTTCCAGCGAAAACGCACTGGAAGGTGGCGACATGGGCTGGCGTAAAGCGGCTCAACTGCCGC CGCCATTCGGTGACATGCTCAGCTCGATGCCAATTGGTGACGTGACGCCTCCGGCGCGCACACCCGGTGGTTTCATTATCCTCAAGCTGCTGGAAAAACG TGGCGGTCAGGGCCAGGCACAGATGCGTGATGAAGTGCATGTGCGTCATATCCTGATCAAACCAAGTGAAATCCGCAGCGAAGAAGCCACCAAACTTCTG GCGCAGAAAATCTACGAGCGTATCGAGAATGGCGAAGACTTCGCCACGCTGGCCAAAAGCTTCTCGGAAGATCCTGGTTCTGCGCTTAACGGTGGCGATC TGAACTGGGTAGATCCCAATTCGCTGGTCCCGGAGTTCCGCGACGTCATGAGCAGCACACCGCAGGGTGAACTGTCCAAACCGTTCAAGACCGCCTACGG CTGGCATGTTCTGGAAGTCCTTGGCCGTCGTGCCACCGACGCAACCGGTCAGGCCCGCGACCAGCAGGCGTTGAGCGTACTGCGTAACCGCAAGTACGAC GAAGAGCTGCAAACCTGGCTGCGTCAGATCCGTGACGAAGCCTACGTTGAAATCAAACTCCCTGGCGCGACCCAGGCTGCACAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACCAAAGCGTTTCGCACTGACACCCGGCGAGCCGGCCGGCATTGGTCCTGACCTTTGCCTGCTGCTCGCCACGCAGCCTCAGCCCTACCCCCTGATCGC CATCACCAGCCGCGACCTGCTTACCCAGCGGGCCGCGCAACTGGGTGTGGCGGTCAGTCTGCTTGACGTCACGCCCGAGACTCTTCCCGATCAGCCCGCG CCTGCCGGCAGCCTGTACGTCTGGCACACCCCCCTGGCTGCTCCGGTAGAAACCGGCGTGCTGAACAAGGCCAATGCCGCCTTCGTTCTACAGACCCTGA CGCGCGCCGGGCAAGGCTGCCTGGACGGGCTGTTCAGCGGCATGATTACCGCGCCGGTGCACAAGGGCGTCATCAATGACGGCGGCATCGCCTTTTCCGG GCACACCGAATTCCTCGCCGAGCTGACTCACACCGAACAGGTGGTGATGATGCTGGCCACTGGCGACCTGCGTGTGGCGCTGGTGACCACTCACCTGCCG
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| Amino Acid Sequence |
>peptidyl-prolyl cis-trans isomerase SurA
MLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAADLQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRN NMSVEQFRAALAHDGLSYEDAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEEFHLANILIATPDSASSDAIQAAAVKAKSIYDQLK KGADFAKIAATTSSSENALEGGDMGWRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRSEEATKLL AQKIYERIENGEDFATLAKSFSEDPGSALNGGDLNWVDPNSLVPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQALSVLRNRKYD EELQTWLRQIRDEAYVEIKLPGATQAAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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