Pseudomonas syringae pv. tomato DC3000, PSPTO_0464

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
ACCGTGAAAAAATCAGGCAGCCAGCGGGTTTTCGCGCTAAAAGGTGGCGGCCATCGAGGCGTGTGATCAAAAAGTGCGCAGTGCTCGAAAGTCGTATCAT CTTTGGCGCCGCTATGGCCCGACCACAGCCCATAATGAACTTGTCGGCGTTACCCCCCTCCAAAAGACCGCGTTCGCGCAGGCACCGACCTGCCAACCGA CGGCTGCCGACCTGCGCAGCGACCGTGTAACGTACTGGCCGCTTTTCAGCAGTCCCGACACTGCAACCGGGCGCGCGTACGATGCAATGAATCTGTAAGC GACCTTGCGCGCACTGGATGCGACGCCTCCTGCACTGGATACGACGCCCCCTGTAGGCGTTTGATTTTCCCTGTTACATGATCGGGTCCGACTCGATCGC CCGGCGCAGTGATGGAGCTTCGCGAAAAGCCTCGCCAACCCATAAGCCGCGTCAGCGTTCACCTGCTGATGACTAGAAGAAACTCACAGGAGTCCACCCC
DNA Sequence for Gene
>PSPTO_0464
ATGAAAGGTTCCAAATCGTTGCTGTTGGCCGCCACGCTCTGTATGCCGGTGCTTGCTCAGGCAGCCGAGCCAGAGGCCTGTCATACGGTCAACTTCTCCG ACGTAGGCTGGACTGACATCACCGTCACCACAGCGGTGACCAGCGCCGTACTCGAGTCACTGGGTTACAAGACCAAGACCACCATGATTTCCGTACCGGT GACCTACAAGTCGCTGGCAGATGGCAAGAACATGGACGTTTTCCTCGGCAACTGGATGCCGACCATGGAAAACGACATCAAGCCTTATCGCGAAGCCGGC ACTGTCGAAACCGTGCGCGCCAACCTCGAAAACGCCAAATACACCCTGGCCGTGCCGCAAGCGCTCTACGACAAAGGCCTGCATGACTTCGCCGACATCA CCAAATTCAAGAAAGAACTGGGCGGCAAGATCTACGGTATCGAACCCGGCAACGACGGCAACCGCCTGATCCAGAGCATGATCGACAAGAACGCCTTCGG CCTCAAAGATGCGGGCTTCAAGGTGGTGGAATCCAGCGAGGCGGCCATGCTCTCGCAGGTTGATCGCGCCGTGAAACGCAAAAACGATGTGGTGTTCCTG GGCTGGGAACCGCACCCGATGAACACACGCTTCAAGATGAAATATCTTACCGGCGGCGATGACTTTTTCGGCCCCAACTATGGCCAGGCGACTATCTACA CCAACACCCGCAAAGGCTACAGTCAGGAATGCAGCAACGTAGGCCAGTTGCTCAAGAACCTGTCCTTCACGCTGGAAATGGAAAGCACCCTGATGGGCAA TGTGCTGGATGACAAGACCAAGCCTGATGCCGCCGCCAAGGCGTGGATCAAGAAAAACCCGCAAGTGCTCGACACCTGGCTGGCAGGCGTGACCACCGTG GATGGCAAACCAGGCCTGGAGGCAGCCAAGGCCAAGTTGACCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGACAGCAGGCGGGCCCGTCCCGCCTGTTGCCCTCTTCACCTTCCGCAAGCGGACACCCGACATCATGCTGACTGATCAAAAAATCCCTCTGGGCGAG TACATCGCCGCATTCGTCGACTGGTTGACGGCCAACGGCGCCGACTACTTCGACGCGATAGCCTCGACACTGGAAATGATGATCCACGGGTTCACCTTTG CCCTGACCTGGTTCAACCCGTTTGTATTGATCGGCCTTATTGCCGCGCTCGCGCATTTTATTCAGCGCAAGTGGGGCCTGACCGTTTTCGTCATCCTGTC GTTTCTGCTGATTCTCAACCTGCATTACTGGCAGGAAACCATGGAAACCCTCGCGCAGGTGCTGTTCGCCACTCTGGTCTGCGTCGTCATCGGCGTGCCG CTGGGCATCATTGCCGCGCACAAGCCGCTGTTCTACACAATCATCCGGCCGCTGCTCGACCTGATGCAGACCGTTCCCACCTTCGTTTACCTGATTCCGA
Amino Acid Sequence
>glycine betaine/L-proline ABC transporter, periplasmic substrate-binding protein
MKGSKSLLLAATLCMPVLAQAAEPEACHTVNFSDVGWTDITVTTAVTSAVLESLGYKTKTTMISVPVTYKSLADGKNMDVFLGNWMPTMENDIKPYREAG TVETVRANLENAKYTLAVPQALYDKGLHDFADITKFKKELGGKIYGIEPGNDGNRLIQSMIDKNAFGLKDAGFKVVESSEAAMLSQVDRAVKRKNDVVFL GWEPHPMNTRFKMKYLTGGDDFFGPNYGQATIYTNTRKGYSQECSNVGQLLKNLSFTLEMESTLMGNVLDDKTKPDAAAKAWIKKNPQVLDTWLAGVTTV DGKPGLEAAKAKLTQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site