Pseudomonas syringae pv. tomato DC3000, PSPTO_0335

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CACCAACCTCAATCTGGAGGACATGGTGCGCAGCGGACGCTTCCGCGAAGACTTGCTGTACCGCCTGAACGTCATCACCCTGCATTTGCCTGCCTTGCGT GAGCGCAGCGAAGACATTCTGACCCTGGCGGACCGCTTTCTGGCCCGCTTCGTCAAAGAGTACGCCCGCCCGGCACGGGGTTTCAGCGAAGAAGCCCGCG CCGCGCTGCTCAACTACCGCTGGCCGGGCAACATTCGTGAGCTGCGCAACGTGATCGAACGCGCCAGCATCATCTGCCCGCAGGAGCGTGTAGAGGTCAG CCATCTGGGCATGGCCGAGCAACCGGCGAACAACGCGCCGCGCGTCGGGGCCGCTCTGAGTCTGGACGAGCTGGAAAAAGCGCACATCGGTGCCGTGCTG GCGACCAGCGAAACCCTGGATCAGGCCGCCAAGACGCTGGGTATCGATGCTTCGACGCTTTACCGCAAACGCAAACAGTACAACCTATGAATGACCTCAA
DNA Sequence for Gene
>PSPTO_0335
ATGAAACTGGCCATGAAGCTGCGCACTCGCCTCTTTCTGAGCATTTCGGCGCTGATCACGGTTGCCTTGCTCGGACTGCTGCTGGGGCTCGTCAGCGTCA TGCAGATGGCGCGCACGCAGGAATCGCTGATTCAGCACAACTTCGCCATTCTGGATCTGGGCTTGAAGTTGCGTCAGAACCTGGGTGACCAACTGGTGTT GATGACCGGGGCCACCCGTAATCCGCCCGAGCTGGAAAAGATTCAGCGTCAGTTCGAGGAGTTGCTGGAGGAAGCGTCGGCGCAGGACACACAGGAGGAC GTGCGCAACGGGCTTGAGGGGACCTGGGTCGATTACCGGCGATTCATCGATGCCTTGAAACAATTCGGCACCGACCCGCGAGGCATACGTGGCAATCCGC AGTTGAGTGAAAGCTTTGACAGCTTGCGTAACGGCTTGCTGAATGTGCACCGCAAGGCGCTGGAAAACATCAGCAGCGCCGAGATCAATTCCCGCGATCG CGCGCTGTGGATCGCGGGCCTTCTGGGGCTGGTCGGGCTGGCGGTGCTGTGCATCGGCTTTGTGACCGCGCACGGTATTGCCCGTCGCTTTGGTGCACCT ATCGAAGCGCTGGCCAAGGCTGCCGACCGCATTGGCGAAGGTGATTACGAGGTCACGCTGCCCATTTCCTCGGCCGCCGAAATGAACCTGCTGACCCGGC GATTCGGCATCATGGCAGAGGCCTTGCGTCAGCACCAGGCGACCAATGTCGATGAGTTGTTGGCCGGCCAGCAGCGCCTGCAGGCGGTGCTCGACAGCAT TGACGACGGCCTGCTGATGATCGATCGCCAAGGCCATCTGGAGCATTTGAACCCTGTTGCTCAGCGCCAGCTCGGCTGGGACGAGAGTCGCCTCGGGCAG AGTCTGGGGGAGGCGCTGAGTCGTCCCGAACTGGACGAGCAATTGCATCTGGTCCTGCGTGGCGGGACCCTGGAGCGCGCCCCGGAAGACCTGGCCATCG ACATCGACGGTGAGTCGCGGCTGCTGACCTACAGCATGACGCCAGTGAGTCACACCAAGGGCCATATCCTGGGTGCTGTGATGGTGCTGCACGACGTCAC CGAGCAGCGGGCATTTGAACGCGTGCGCAGCGAATTCGTCCTGCGCGCCTCCCATGAACTGCGCACGCCGGTCACGGGCATGCACATGGCGTTCGGCCTG CTGCAGGAGCGATTGCACTTCGCCCCCGAATCCCGCGAAGCCGATCTGCTCAATACCGTCACCGAAGAGATGCAGCGCTTGATGCAGCTCATCAATGACC TGCTGAATTTCTCGCGCTACCAGAACGGCCTGCAAAAACTCAAACTGGCACCGTGCTCTATCGAAACCTTGCTGGAAGAAGCCAGAGCCCGATACGAAGG GCAGGCGCAGGAGCAGGAGATCGTGCTGATGCTGGACATCCAGGAACCGATGCCGCGCCTGCATGCGGACCAGTCCCAGCTGGAGCGGGTGCTGGACAAT CTGCTCGACAACGCATTGCGTCATACACCGCCCAACGGCCTGATCCGCTTGCAGGCGAGGCGTCACGGCGAGCGGGCGATCATCAGTGTCGAAGACAACG GCGAAGGCATCGCCTATGGGCAGCAAGGACGAATCTTCGAGCCCTTCGTCCAGGTCGGCCGCAAAAAAGGCGGCGCTGGCCTTGGCTTGGCGCTGTGCAA GGAAATCGTCCAGTTGCACGGCGGGCGCATGGGCGTCTACTCAAGGCCGGGGCAGGGCACTCAGTTCTATATGGCGCTGCTGCTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGTTTACGCCTTAAGCCACCAAGCCCTGTGGCCTCAGTGCTGCATTTTGAGGAGTTCGCAGCGCAAGGCGTCCTTTAAAAAGTTGGCGCTAGTAATGATG GCGACACGCGATGACTGTCAGTACACCGCCCTCATAGAAGTAGACAAGACGATGCTCTTTGGTGATGCGGCGGGACCAGTACCCGGTTAAATCGCCGGTC AGTGGTCTCGGCTTACCGGTGCCTTTGAACGGCGTACGCAGGCACTGGCTAATGAGGCTGTCTATTGACAGGGAAATTGCCTGATCGGCATCCTTCCAGT GAGTGTAATCATCCCATCCCGATAGGGTGAAATGCACGCCGACAGCGGTCCTTGCTGCCTGTTTATTCTTCTGTTTCTGACCCTGTGACATCCAGTGAAA TTTCCTTTACGAAGGCTTTTCCGGCTTTGTGCTGCGCAATGGATTGCCGCAGGTGCTTCGCATTGGCCTCTGTGCCTAGCAGGTACATGGTTTCTGACAT
Amino Acid Sequence
>sensory box histidine kinase
MKLAMKLRTRLFLSISALITVALLGLLLGLVSVMQMARTQESLIQHNFAILDLGLKLRQNLGDQLVLMTGATRNPPELEKIQRQFEELLEEASAQDTQED VRNGLEGTWVDYRRFIDALKQFGTDPRGIRGNPQLSESFDSLRNGLLNVHRKALENISSAEINSRDRALWIAGLLGLVGLAVLCIGFVTAHGIARRFGAP IEALAKAADRIGEGDYEVTLPISSAAEMNLLTRRFGIMAEALRQHQATNVDELLAGQQRLQAVLDSIDDGLLMIDRQGHLEHLNPVAQRQLGWDESRLGQ SLGEALSRPELDEQLHLVLRGGTLERAPEDLAIDIDGESRLLTYSMTPVSHTKGHILGAVMVLHDVTEQRAFERVRSEFVLRASHELRTPVTGMHMAFGL LQERLHFAPESREADLLNTVTEEMQRLMQLINDLLNFSRYQNGLQKLKLAPCSIETLLEEARARYEGQAQEQEIVLMLDIQEPMPRLHADQSQLERVLDN LLDNALRHTPPNGLIRLQARRHGERAIISVEDNGEGIAYGQQGRIFEPFVQVGRKKGGAGLGLALCKEIVQLHGGRMGVYSRPGQGTQFYMALLL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site