Pseudomonas syringae pv. tomato DC3000, PSPTO_0115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0115
NCBI Old Locus TagPSPTO0115
Name
Synonym: PSPTO0115
Replicon chromosome
Genomic location 136326 - 137708 (- strand)

Cross-References

RefSeq NP_789974.1
GI 28867355
Entrez 1181723
INSDC AAO53669.1
NCBI Locus Tag PSPTO_0115
NCBI Old Locus Tag PSPTO0115
UniParc UPI0000008300
UniProtKB Acc Q88BA2
UniProtKB ID NORM_PSESM
UniRef100 UniRef100_Q88BA2
UniRef50 UniRef50_Q9HTR0
UniRef90 UniRef90_Q88BA2

Product

Feature Type CDS
Coding Frame 1
Product Name
multidrug efflux protein NorA
Synonyms
Evidence for Translation
Charge (pH 7) 8.00
Kyte-Doolittle Hydrophobicity Value 0.818
Molecular Weight (kDa) 48.8
Isoelectric Point (pI) 9.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 437 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001295 (965 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0115

Human Homologs

Ensembl 110, assembly GRCh38.p14
solute carrier family 47 member 2 [Source:HGNC Symbol;Acc:HGNC:26439]
E-value: 1.5e-15
Percent Identity: 22.6

References

No references are associated with this feature.