Pseudomonas syringae pv. tomato DC3000, PSPTO_0083 (algC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016868 | intramolecular transferase activity, phosphotransferases |
Inferred from Sequence Model
Term mapped from: InterPro:SSF53738
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0005975 | carbohydrate metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:SSF53738
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0071704 | organic substance metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF00408
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pst00052 | Galactose metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst00230 | Purine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst00010 | Glycolysis / Gluconeogenesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst00030 | Pentose phosphate pathway | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst00500 | Starch and sucrose metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst01120 | Microbial metabolism in diverse environments | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst00051 | Fructose and mannose metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst00521 | Streptomycin biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pst00520 | Amino sugar and nucleotide sugar metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF02878 | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I | IPR005844 | Alpha-D-phosphohexomutase, alpha/beta/alpha domain I | 15 | 144 | 5.3E-35 |
| FunFam | G3DSA:3.40.120.10:FF:000025 | Phosphomannomutase | - | - | 254 | 372 | 2.6E-69 |
| Pfam | PF02879 | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II | IPR005845 | Alpha-D-phosphohexomutase, alpha/beta/alpha domain II | 160 | 257 | 3.5E-28 |
| PRINTS | PR00509 | Phosphoglucomutase/phosphomannomutase family signature | IPR005841 | Alpha-D-phosphohexomutase superfamily | 103 | 117 | 4.7E-25 |
| SUPERFAMILY | SSF53738 | Phosphoglucomutase, first 3 domains | IPR016055 | Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III | 262 | 367 | 6.28E-34 |
| SUPERFAMILY | SSF53738 | Phosphoglucomutase, first 3 domains | IPR016055 | Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III | 12 | 146 | 2.2E-38 |
| PRINTS | PR00509 | Phosphoglucomutase/phosphomannomutase family signature | IPR005841 | Alpha-D-phosphohexomutase superfamily | 174 | 193 | 4.7E-25 |
| Gene3D | G3DSA:3.40.120.10 | - | - | - | 176 | 253 | 3.1E-32 |
| PANTHER | PTHR43771 | PHOSPHOMANNOMUTASE | - | - | 7 | 455 | 0.0 |
| Pfam | PF02880 | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III | IPR005846 | Alpha-D-phosphohexomutase, alpha/beta/alpha domain III | 262 | 369 | 4.6E-22 |
| FunFam | G3DSA:3.30.310.50:FF:000007 | Phosphomannomutase/phosphoglucomutase | - | - | 373 | 465 | 7.3E-50 |
| Pfam | PF00408 | Phosphoglucomutase/phosphomannomutase, C-terminal domain | IPR005843 | Alpha-D-phosphohexomutase, C-terminal | 377 | 447 | 1.5E-13 |
| PRINTS | PR00509 | Phosphoglucomutase/phosphomannomutase family signature | IPR005841 | Alpha-D-phosphohexomutase superfamily | 208 | 221 | 4.7E-25 |
| PRINTS | PR00509 | Phosphoglucomutase/phosphomannomutase family signature | IPR005841 | Alpha-D-phosphohexomutase superfamily | 237 | 252 | 4.7E-25 |
| CDD | cd03089 | PMM_PGM | - | - | 15 | 454 | 0.0 |
| FunFam | G3DSA:3.40.120.10:FF:000021 | Phosphomannomutase/phosphoglucomutase | - | - | 176 | 253 | 1.5E-43 |
| Gene3D | G3DSA:3.40.120.10 | - | - | - | 5 | 156 | 4.6E-47 |
| Gene3D | G3DSA:3.30.310.50 | - | - | - | 373 | 465 | 2.6E-30 |
| SUPERFAMILY | SSF53738 | Phosphoglucomutase, first 3 domains | IPR016055 | Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III | 157 | 260 | 3.26E-33 |
| FunFam | G3DSA:3.40.120.10:FF:000001 | Phosphoglucosamine mutase | - | - | 12 | 158 | 1.3E-43 |
| SUPERFAMILY | SSF55957 | Phosphoglucomutase, C-terminal domain | IPR036900 | Alpha-D-phosphohexomutase, C-terminal domain superfamily | 371 | 465 | 5.06E-26 |
| Gene3D | G3DSA:3.40.120.10 | - | - | - | 254 | 372 | 3.7E-43 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.