Pseudomonas mendocina NK-01, MDS_4604

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pmk00521	Streptomycin biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pmk01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pmk00523	Polyketide sugar unit biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pmk01130	Biosynthesis of antibiotics	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.90.25.10	-	-	-	157	280	1.6E-110
FunFam	G3DSA:3.40.50.720:FF:000159	dTDP-4-dehydrorhamnose reductase	-	-	3	273	1.1E-64
Gene3D	G3DSA:3.40.50.720	-	-	-	3	273	1.6E-110
CDD	cd05254	dTDP_HR_like_SDR_e	-	-	2	279	2.46174E-106
PANTHER	PTHR10491	DTDP-4-DEHYDRORHAMNOSE REDUCTASE	IPR005913	dTDP-4-dehydrorhamnose reductase family	2	286	4.5E-68
SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	IPR036291	NAD(P)-binding domain superfamily	1	286	3.95E-99
NCBIfam	TIGR01214	JCVI: dTDP-4-dehydrorhamnose reductase	IPR005913	dTDP-4-dehydrorhamnose reductase family	2	286	1.3E-102
Pfam	PF04321	RmlD substrate binding domain	IPR029903	RmlD-like substrate binding domain	1	286	5.4E-109

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.