Pseudomonas mendocina NK-01, MDS_4468
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina NK-01 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCGGGCCTGCTGCCCGGCCACAGCTACCGCCTGCTGCTGAACGGCCAACCCCAGGGCGAGATCAGCCGTAGCCCGGTGTTCTCCCTGCAGCACGTCGA CCGCGGCACGCACCAGCTGGTGGCAGAAATCATCGACTCCGCCGGCCTGATCGTCGAGCGCACGCCGGCACAGCCCTTCCACATGCACCGCATGAGCCTG GCGCAGAAGCGCAAGGTCAACCCGTGCAAGAAAGATGAATACGGCGTTCGCCCCGAGTGCCCGCTGAAAGACAAGCCCAAGGAAGAGGCCAGCATCCTTC CTTTCCTCTGAAAGCAGATTGCACCTTAATGGTGCAATCTGGCGCACCACCTCCTAAGCTCTCCCTGTTTTGGGTCGCTTTTCCCCGCCCGGCCTCGCCT CAGCACCACCAAAACCTGGCAGACCGCACAAATAATGCGTCTTTTCAGGGCCTTGGTTTGCTTCTTGCATTTTCCTGCTCATCGCCGGAACGCACTGCTT
|
|
| DNA Sequence for Gene |
>MDS_4468
ATGACCATCAACGACGCGCTGCACCGACTGCTACTCGACAACCTGACCACCGCCACCCTGCTGCTCAACAGCCAGCTGTGCCTTGAGTACATGAACCCGG CGGCGGAAATGCTCCTGGCCGTTAGCGGCCAGCGCAGCCATGGCCAGTTCATCAGTGACCTGTTCACCGAATCGCCCGAGGCGCTGTCGTCACTGCGCCA GGCGGTGGAGCAGGCGCATCCGTTCAACAAGCGCGAAGCCGTGCTGACCTCGGTCACCGGCCAGACGCTGACTGTGGACTACGCGGTGACGCCACTGTTC AGCAAGGGCGAAACCCTGCTGCTGCTGGAGGTGCACCCCCGTGACCGCCTGCTGCGCATCACCAAGGAAGAGGCGCAGCTGTCCAAGCAGGAAACCACCA AGTTGCTCGTCCGCGGCCTGGCCCACGAAATCAAGAATCCGCTCGGTGGCATCCGTGGCGCGGCGCAACTGCTCTCCCGCGAGCTGCCCAACGAAGACCT CAAGGACTACACCAACGTCATCATCGAAGAGGCCGACCGCCTGCGAAATCTGGTCGACCGCATGCTCGGTTCGAACAAGCTGCCGTCGCTGGCCATGACC AACGTGCACGAGGTCCTGGAACGCGTCGCCAACCTGATCGAAGCGGAAAGCCAGGGCGGCATCACCTTGGTGCGCGATTACGACCCGAGCATTCCCGACC TGCTGATCGACCGCGAGCAGATGATCCAGGCCGTGCTCAATATCGTGCGCAATGCCATGCAGGCCATCTCCGGGCAGAAACATGACATGGGCCTGGGGCG CATCAGCCTGCGCACCCGCACCCTGCGCCAGTTCACCATCGGCCATACGCGCCACCGCCTGGTGGTCAAGGTCGAGATCATCGACAACGGCCCCGGCATT CCACCGGAGCTGCAGGAAACCATCTTCTATCCCATGGTCAGCGGGCGTGCCGACGGCACTGGCCTGGGCCTGGCCATCACCCAGAACATCATCAGCCAGC ATCAAGGTCTGATCGAGTGCGAGAGCTATCCCGGGCACACCGTATTCTCGATCTTCCTGCCGCTGGAACAAGGAGCGCCCACGCCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCGCAGTGAAACCGTCTGGATTGTCGACGACGATCGTTCCATCCGCTGGGTCCTGGAAAAGGCCTTGCAGCAGGAAGGCATGACCACTCAGAGTTTCGA CAGTGCAGACGGTGTACTCGCCCGCCTGACCCGCCAGCAGCCGGACGTGATCATCTCCGATATCCGTATGCCCGGTGCCAGCGGTCTCGATCTGCTGGCA CGCATCCGCGAGCTGTACCCACGCCTGCCGGTGATCATCATGACCGCGCATTCCGACCTGGACAGCGCCGTGGCCAGCTACCAGGGCGGCGCCTTCGAAT ACCTGCCCAAGCCGTTCGACGTAGACGAGGCGGTGTCACTGGTCAAGCGCGCCTTCCAGCACGCCCAGGAACAACAGAGCCTGGCCGCACCCGCCGCACA GGCGCGCACGCCGGAGATCATCGGCGAAGCGCCGGCGATGCAGGAGGTGTTCCGCGCCATTGGCCGCTTGAGCCACTCCAATATCACCGTGCTGATCAAT
|
|
| Amino Acid Sequence |
>PAS/PAC sensor signal transduction histidine kinase
MTINDALHRLLLDNLTTATLLLNSQLCLEYMNPAAEMLLAVSGQRSHGQFISDLFTESPEALSSLRQAVEQAHPFNKREAVLTSVTGQTLTVDYAVTPLF SKGETLLLLEVHPRDRLLRITKEEAQLSKQETTKLLVRGLAHEIKNPLGGIRGAAQLLSRELPNEDLKDYTNVIIEEADRLRNLVDRMLGSNKLPSLAMT NVHEVLERVANLIEAESQGGITLVRDYDPSIPDLLIDREQMIQAVLNIVRNAMQAISGQKHDMGLGRISLRTRTLRQFTIGHTRHRLVVKVEIIDNGPGI PPELQETIFYPMVSGRADGTGLGLAITQNIISQHQGLIECESYPGHTVFSIFLPLEQGAPTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|