Strain | Pseudomonas mendocina NK-01 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GATCATCGAGGCTGGCAAGAAGCATGGCCTGACGCCTTACGGCACCGAGACCATGCACGTCTTGCGCGCCGAGAAGGGCTTCATCATCGTCGGCCAGGAC ACCGACGGTTCGGTCACCCCGGACGACCTGGGCATGGGCTGGTGCGTTGGCCGTACCAAGCCGTTCTCCTGGATCGGCTGGCGCGGCATGAACCGTGAGG ACTGCCTGAAGGAAAACCGCAAGCAGCTGATCGGCCTCAAACCGCTGGACCCGAACAAGGTCCTGCCGGAGGGCGCGCAGCTGGTGTTCGATCCCAAGCA GTCGATTCCGATGACCATGGTCGGTCACGTCACCTCGAGCTACATGAGTTCGGCGATGGGTTACAGCTTCGCCATGGCCCTGGTCAGAGGTGGCCTGTCG CGCATCGGCGAGCGCGTGTTCGCGCCGCTGGCCGATGGCAGCGTGATCGAAGCCGAAATCGTCAGCCCCGTGTTCTATGACCCGAAAGGGGATCGCCAGA
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DNA Sequence for Gene |
>MDS_4447
ATGTCTAACGTCAATGTCTACAAGCAACGCCCCGACGACATCGCCGGGCAATCGCCGCTGCACCACGCCGGCCTGCACGAGCTGGCCGGCAAGGGCCGCA AGGGCGCCGGAGTGACCCTGCGCGAGAAGAAGCTGCTGGGCCATCTTGTCCTGCGTGGCGACGCCGACGATGCCAACTTCGCCGGCGGTGTGCACAAGGC CCTGGGTCTCGAGCTGCCAGTGGCGCTCACCCTGGTCGCCAACGGCGATACCTCGCTGCAGTGGCTGGGCCCGGACGAGTGGCTGCTGATCGTGCCTGGC GGTACCGAGTTCGAGGTCGAGCGTAAGCTGCGCGAGGCCCTGGATGGTCAGCACATTTCGGTGGTCAACGTCAGCGGTGGGCAGACCCTGCTCGAACTGC GCGGCCCCAAGGTGCGCGAACTGCTGATGAAGTCCAGCAGCTACGACGTGCATCCGAGCAACTTCCCGGTGGGCAAGGCGGTCGGCACGGTGTTTGCCAA GTCGCAACTGGTGATTCGCCACACTGGCGAAGACACCTGGGAGCTGCTGGTCCGCCGCAGTTTCTCCGACTACTTCTGGCTATGGCTGCAGGATGCCAGC GCCGAGTATGGGTTGGCGGTCGAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCAGCATAGATCTTGTGGGAGGGGCTTTAGCCGCGACTTTACTCGTGGCCAACGCCTGTCGCGGCTAAAGCCCCTCCCACGAATGCCTCCGAGGGCCC GAGTATGAGCCGCACCCCCGACACCTGGATTCTCACCGCTCACTGCCCGAGCGTGCTCGGTACCGTGGATGCGGTGACGCGCTTTCTGTTCGAGCAGCGC TGCTACGTCACCGAGCACCATTCGTTCGATGACCGGCTGTCCTCGCGCTTCTTCATCCGCGTCGAATTCCGCCAGCCGCAGGACTTTGACGAGGCAGCGT TCCGCGCCGGTGTAGCCGAGCGGCTGGCACCATTCGGCATGCAGGTCGAGCTGACGCCACCAGGCTATCGCGCCAAGGTGGTGCTGATGGTTTCCAAGGC CGACCACTGCCTGAACGATCTGCTCTATCGCCAGCGCATCGGCCAGTTGGCCATGGACGTGGTCGCGGTGGTGTCCAACCACCCGGACCTCAAACCACTC
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Amino Acid Sequence |
>sarcosine oxidase subunit gamma
MSNVNVYKQRPDDIAGQSPLHHAGLHELAGKGRKGAGVTLREKKLLGHLVLRGDADDANFAGGVHKALGLELPVALTLVANGDTSLQWLGPDEWLLIVPG GTEFEVERKLREALDGQHISVVNVSGGQTLLELRGPKVRELLMKSSSYDVHPSNFPVGKAVGTVFAKSQLVIRHTGEDTWELLVRRSFSDYFWLWLQDAS AEYGLAVEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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