Pseudomonas mendocina NK-01, MDS_4192
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0010181 | FMN binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00903
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pmk01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pmk00240 | Pyrimidine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01613 | Flavin reductase like domain | IPR002563 | Flavin reductase like domain | 12 | 158 | 9.1E-32 |
| SUPERFAMILY | SSF50475 | FMN-binding split barrel | - | - | 7 | 160 | 1.62E-48 |
| SMART | SM00903 | Flavin_Reduct_2 | IPR002563 | Flavin reductase like domain | 11 | 157 | 1.5E-53 |
| PANTHER | PTHR30466 | FLAVIN REDUCTASE | - | - | 3 | 161 | 1.2E-33 |
| Gene3D | G3DSA:2.30.110.10 | - | IPR012349 | FMN-binding split barrel | 1 | 164 | 2.2E-44 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.