Pseudomonas mendocina NK-01, MDS_3969

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3969
Name
Replicon chromosome
Genomic location 4377821 - 4378642 (- strand)

Cross-References

RefSeq YP_004381752.1
GI 330504883
Entrez 10458751
INSDC AEB60000.1
NCBI Locus Tag MDS_3969
UniParc UPI000206E42C
UniProtKB Acc F4DWP8
UniProtKB ID F4DWP8_PSEMN
UniRef100 UniRef100_F4DWP8
UniRef50 UniRef50_D4XAX9
UniRef90 UniRef90_W6RC71

Product

Feature Type CDS
Coding Frame 1
Product Name
peptidase M48, Ste24p
Synonyms
Evidence for Translation
Charge (pH 7) 0.89
Kyte-Doolittle Hydrophobicity Value -0.160
Molecular Weight (kDa) 29057.8
Isoelectric Point (pI) 7.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 343 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004284 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3969

Human Homologs

References

No references are associated with this feature.