Pseudomonas mendocina NK-01, MDS_2773
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF12836 | Helix-hairpin-helix motif | - | - | 41 | 104 | 8.0E-25 |
| PANTHER | PTHR21180 | ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1 | - | - | 25 | 106 | 2.5E-20 |
| SUPERFAMILY | SSF47781 | RuvA domain 2-like | IPR010994 | RuvA domain 2-like | 28 | 106 | 3.45E-30 |
| Gene3D | G3DSA:1.10.150.280 | - | - | - | 32 | 106 | 3.3E-22 |
| NCBIfam | TIGR00426 | JCVI: competence protein ComEA helix-hairpin-helix repeat region | IPR004509 | Competence protein ComEA, helix-hairpin-helix domain | 43 | 106 | 1.6E-25 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.