Pseudomonas mendocina NK-01, MDS_2296
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina NK-01 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGATCTGCTCGCCTGCGGCCGCGGCGAACTGTTCGGCCCCGGGAACGCGCAACTGCCCGCCCCGAACATGCTGATGATTGATCGCATCGTTCACATTA GCGAGACCGGCGGCAAGTACGGCAAGGGCGAAATCGTCGCTGAGCTCGATATCAATCCGGATCTGTGGTTCTTTGCGTGCCACTTCGAAGGCGACCCGGT CATGCCAGGCTGCCTCGGCCTCGATGCCATGTGGCAGCTGGTTGGCTTCTATCTGGGCTGGCAAGGCAACCCAGGCAAGGGCCGCGCCCTGGGCTCGGGC GAAGTGAAATTCTTCGGTCAGGTTCTGCCGACCGCCAAGAAAGTCACCTACAACATCCATATCAAGCGCACCATCAACCGCTCACTGATCCTCGGTATCG CCGATGGCACCGTAGCCGTCGATGGCCGCGAGATCTACAGTGCCGAAGGCCTGCGCGTTGGCCTGTTCACCTCTACCGACAGTTTCTGAAGGACTTGCAC
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| DNA Sequence for Gene |
>MDS_2296
ATGCGTCGTGTCGTGATTACCGGTCTGGGCATCGTTTCCTGCCTGGGCAATGACAAAGAAGCCGTTGCCGACAGCCTCCGCGCGGGCAAATCCGGCATCC GTTTCAACCCGTCCTATGCCGAAATGGGCCTGCGTAGCCATGTTTCCGGCTCGGTCAACCTGAACCTGGAAGAGCTGATCGACCGCAAGCTGTTCCGTTT CATGGGCGACGCCGCCGCCTACGCCTACCTGGCGATGGAGCAGGCGATCAAGGACTCCGGTCTTAGCGAAGAGCAGATCTCCAACCCGCGCACCGGCCTG ATCGCCGGTTCCGGTGGTGCATCCACCGTCAACCAGATGGAAGCCATCGACACCCTGCGCGAGAAAGGCGTCAAGCGCATCGGCCCATACCGTGTGACCC GCACCATGGGCAGCACCGTGTCGGCGTGCCTGGCCACTCCATTCAAGATCAAGGGCGTCAACTTCTCCATCTCCTCGGCCTGCGCTACCAGCGCACATTG CATCGGCCAGGCGATGGAGCAGATCCAGCTGGGCAAACAGGACGTGGTCTTCGCCGGTGGCGGTGAAGAAGAGCACTGGAGCCAGAGCTGCCTGTTCGAC GCCATGGGTGCCCTCTCCACCCAGTACAACGACACCCCGGAAAAAGCCTCGCGCGCCTATGACGCCAAGCGTGACGGTTTCGTCATCGCCGGCGGTGGCG GCATGGTCGTGGTCGAAGAGCTGGAACACGCCCTGGCCCGTGGCGCCAAGATCTACGCAGAAATCGTCGGCTACGGCGCGACCAGCGACGGCTACGACAT GGTCGCCCCGAGCGGCGAAGGCGCCATCCGCTGCATGCAGCAGGCGCTGGCTACCGTCGACACCCCGATCGATTACCTGAACACCCACGGCACCTCCACC CCGGTCGGCGACGTCGCTGAAATCCGCGGTGTACGTGAAGTGTTCGGCGACAAGGCCCCGGCCATCAGCTCGACCAAGAGCCTGTCCGGCCACAGCCTCG GCGCCGCCGGCGTGCAGGAAGCGATCTACTGCATGCTGATGATGGAAGGCAACTTCATTGCTGGCTCGGCCAACATCGACGAGCTCGACCCGGAAGTGGC CGACATGCCGATCCAGCTCACAACCGTCGAGAACGCCAAGCTCGACACCGTGATGAGCAACAGCTTCGGCTTCGGTGGCACCAACGCCACCCTGGTGCTC AAGCGCTGGGCTGGCAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGCTGCGGTAAAGAAAACGGCGCCTTTGGGCGCCGTTTTCGTTTCGTGGCCTGCCAAACACGTCAGACCTTGAAGCGCGCCACCAGGTTGTTCAAATCG ACCGCCAGACGCGACAGCTCCTGACTGGCTGCACTGGTCTGATTAGCGCCCGCCGAGGTCTGCATCGACAGGTCGCGGATATTGACCAGATTGCGATCCA CCTCGCGCGCCACCTGCGCCTGCTCCTCGGAAGCGCTGGCGATCACTAGGTTGCGCTCGTTGATCGAGGAAATCGCCTGGGCGATCTGCTCCAGCGCAAC GCCGGCAGCCTGAGCCACCTCCAACGTGGAACGAGCACGACCGTTGCTGCTCTGCATGGCGCTGACGGCGCGATCTGTCCCACTCTGAATACCACCGATC ATCTGTTCGATTTCCTGGGTCGACTGTTGGGTGCGATGTGCCAAAGCCCTTACCTCGTCGGCCACCACGGCGAAGCCACGGCCAGCGTCGCCGGCCCGCG
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| Amino Acid Sequence |
>3-oxoacyl-ACP synthase
MRRVVITGLGIVSCLGNDKEAVADSLRAGKSGIRFNPSYAEMGLRSHVSGSVNLNLEELIDRKLFRFMGDAAAYAYLAMEQAIKDSGLSEEQISNPRTGL IAGSGGASTVNQMEAIDTLREKGVKRIGPYRVTRTMGSTVSACLATPFKIKGVNFSISSACATSAHCIGQAMEQIQLGKQDVVFAGGGEEEHWSQSCLFD AMGALSTQYNDTPEKASRAYDAKRDGFVIAGGGGMVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAIRCMQQALATVDTPIDYLNTHGTST PVGDVAEIRGVREVFGDKAPAISSTKSLSGHSLGAAGVQEAIYCMLMMEGNFIAGSANIDELDPEVADMPIQLTTVENAKLDTVMSNSFGFGGTNATLVL KRWAGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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