Strain | Pseudomonas aeruginosa strain AZPAE14550 AZPAE14550_contig_4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGGGCACCAACAGGGTGTCCAGGCTTTCCGGCGGACAGTCGCGCCAGGCGAGGTCGGCGCAGATGCGGATGCCCGCGGAACTGGGCACCGCTTCGCTA CGCTCGCCGAGCACCTGTATCCGGTAGAAAGGCGGCAGGCCCTGGCGCTGGCGTTCGACGTTGGCCGAGGCGAATACCTGCAGCGGTCCGGTCACGTCCA GGCTCATCACGTCGGGATAGATCAGGCAGGCAATCAGGCGCGGTTCGGGCATGGCACAACCTCATGGCGATGGCGGCAGTCTGGCGTCCTTCGGGCCTGG CCGCAATGCCAGTCGGCCCACGGATCTTGCCATTCGCTCGCCGGGGCGTCCCGCTGCGCCGATGGTTGGTATCGCCTCGGCACGCCGCATGCCCTATTGT CTGGTAACGGGTGATGGCTTTTTGACTCATCGCTGCAGAGGCGCCAGGGTATTGTCGTCCAGGCCTGTTTCAGCGTTCGGTCCGAGGTAGGGGAGTCAGC
|
|
DNA Sequence for Gene |
>NQ79_RS07440
ATGCTTGCACGCGACAGCCTGGTACAGGCTGGTCTGCCGGATAATCCGTATGCGCGCCAGTTGCGCAACGGCTTTCGTTGGTTGCGGTTCGAAAAGGAGC TGGAAAACGAGTTTCGCGAGTTTCTCAGCTGGAACTCGCTGATGCAGCGGCGCGCTGCCATCGGGGTGGCGTTCCTGATCTGGGCGCTGTTCATCGTGGC CGACTGGATGATGGTGGACATCCGCCTGCACCCCAGCCTGTTCGAGCAACTGCTGGGCGTGCGCCTGGGAATGATCGGCCTGCTGCTGGTGGTCTGGCCG GCGGCCTTCCTGCCCAGCCTGCGCAAGGTCGGCGATGCCATCGCGCCCTACTGCCTGCTGCTGATCAACCTGGCGGTGCTGGCCTGCGACGTGCTGTTCG AGTGGCATGGGGTGCCGCGCTTCACCCAACTGGGCGCGACCCTGGGTATCCTCGCGGTGTTCTTCCCGCTCGGCCTGGCGTTCTGGGCCTGCGTGCGCCT GGCGTTGCTGTGCCTGGCCCTGAACCTGGCGGTATTCCTGCTTTTCGGCGGCGAAGAGAACCTGCGTACCAACCTGCTGAATACGCTCTACAACGGCCTG GTGGTGCTGATCTGTTCGTTCGCCCTGTACCTGCAGGACTACGCCCAGCGCGAGCAGTTCCTCGGCCGGCGGCTGCTGGGCATGATGGCCGAACAGGACA GCCTCACCGGCCTGGTCAACCGACGCTACTACGAGCTGCTCGCCCAGCGGGCCCTGGAGCAGGGCGCCCGCGAAGAAAAGGGAGTGGCGCTGATCCTGGT GGATGTCGACGACTTCAAGGCCTACAACGACCACTACGGGCATCCGGCCGGCGATGCCGCCCTGCGCCAGCTTGGCGTCGTGCTCCGGCAGGGCGCGCGG CGGCCGCTGGATATCGCCGCGCGCCTGGGCGGGGAGGAGTTCGCCGTGTTGCTCTACGACAGCGAGGAGGGCAACACCCTGGCCATCGCCGAGCGCCTGC GGCAGGCGGTGGAGGCGCTGGGCATCGAGCACCTGGGCTCCAGCGCCGGCCCCTGCCTGACCATCAGCCTGGGGGTGGCCTATTCGACCTCCGGCATGGG CCTGGACGCGCTCTATCGCGAGGCCGACCGCGCGCTCTACGAGGCCAAGGATGCAGGGCGCAACGCGGTGCGCGTGGCGTTCCGGCAGCACGACCGCCTC GAATAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AGGAAACGAAAAAAGGCGCCCGTGGGCGCCTTTCGTCGTATGGAACGGCTCAGCCTTGGCTGGGCATACTCCAGTCCTGCAGGTTGTAGCCGTTGTGGCT GAGTTCTTCGCGTGCCTGTTGCAGCAGGCCGGCAAGCTGCTCCGGATCGGAGTAGGCGGAGCTCGGAATGCGTGCACGGCCCAGCAGGCGGGTGCCAGTG CGATCGACTACGGACAGGCTCAGGCCGCCGTCACTGCCTAGCTCGGACCAGGCAACGCACTGGTATGGCTGGAAGGCGCGCCCGGTGATCAGCAAAGCCT CGTTGAAACGGAGCGTAGCGTTCATGGGAGTCGGTCTCTCTCGTTCATGTCTGTGTGGAACATGGGTGGCGCTTCCCGGCTCCACCGTGTTCGGTCACGC TAACTGATGCTTTCGAAAGCGAAAAAGTCACGGCATGGCGCGTTTGTGCAACAGGTTGTCGCTTTTTCGAAGGGTTTTAGCGTGCCGAAGCGGCTAGGCG
|
|
Amino Acid Sequence |
>histidine kinase
MLARDSLVQAGLPDNPYARQLRNGFRWLRFEKELENEFREFLSWNSLMQRRAAIGVAFLIWALFIVADWMMVDIRLHPSLFEQLLGVRLGMIGLLLVVWP AAFLPSLRKVGDAIAPYCLLLINLAVLACDVLFEWHGVPRFTQLGATLGILAVFFPLGLAFWACVRLALLCLALNLAVFLLFGGEENLRTNLLNTLYNGL VVLICSFALYLQDYAQREQFLGRRLLGMMAEQDSLTGLVNRRYYELLAQRALEQGAREEKGVALILVDVDDFKAYNDHYGHPAGDAALRQLGVVLRQGAR RPLDIAARLGGEEFAVLLYDSEEGNTLAIAERLRQAVEALGIEHLGSSAGPCLTISLGVAYSTSGMGLDALYREADRALYEAKDAGRNAVRVAFRQHDRL E
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|