Pseudomonas aeruginosa AZPAE14550, NQ79_RS27200

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14550 AZPAE14550_contig_27, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTACAGCGAGGCGATCGTGGTGATGGCGCGCCCCGGTCACCCCCTGGCCCAGGCCGCCGCGCTGGACTGGGAAGACGTGCGGCGCTACGACTGGATCGTC TGGCCGCCCGGCTCGCCGATCCGCAGCAAGCTCGACATGGCCCTGACCCAGGGCGGCCGGCAGCCGCCGGCCTACCGCCTGGAGTCATCGTCGATGCTGG CCAACATCGAATTGTTGCGTGGCAGCGACATGCTGTCCATCGGCTCGGCGCGGGTGGTCGAGCACCTTGCCGGGCTCGGCCTGGTGGCCAGGCTGGCGCT GGAGATTCCCGGCGAGGGCGCGGTGGGCATGTGCTGGCGCGACGAACCGCACCGCGACCGTGCCAGCGAAGACCTGCTGGCCTGCCTGCGCGAAGGCGCG GCGGCCGAGTAGGGCGCCGGCCGGCGGGTGCTATTGCAAAAAGGCCGCGGCTTCTCGACAATGCGATTCATTATCATTCATGTGTCGCCCCGACTTTCCC
DNA Sequence for Gene
>NQ79_RS27200
ATGTCCGCCCCGATCCTTCTCAGCGCCCACCATCGCGCCATGCATGCGCTGTACAGCGAGCACCATGGCTGGTTGCAGAACTGGCTGCGCGGCAAGCTGG GCTGCGCGGCGGACGCGGCGGACCTGGCCCAGGACACCTTCCTGCGCATCCTGCTCAAGCGCGAACTGCGCGAGATCGGCATGCCGCGCGCGTTCCTGCG GACCATCGCCCGCGGCCTGGTGATCGACCACTGGCGTCGCGAGGAACTGCAGCGCGCCTACCTCGAAAGCATCGCCCACCTGCCCGAGGCACAGGCGCCG TCGCCCGAGGCGCGGGAACTGGTGCTGGAACTGCTGGAGGAAATCTCGCGGATGCTCGACGGGCTCAAGCCGAAGGTCCGCACCGCCTTCCTCCTGGCCC AGTGCGAAGACCTCAGCCACCGGCAGATCGCCGAACGCATGGGGGTTTCCCAGCGTAGCGTCGAGCGCTACGTGGCCGAGGCGCTGTACCACTGCTACCT GCTGCGCTACGGCGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGAGCCGTGGACGGGACGCGCGGTAGGGTCGACGAAGCGGTGGTCAGGCAGGCCATCCACTGGCTGGTCCGCCTGCGCTCGCAGCCGGCCGACGATCG CCTGCAGCGCGCCTGCGCGGCCTGGCGCGCGGAGCACGGCGAGCACGAGCGGGCCTGGCAGCAGGTCAGCGCGCTCAACGAAGAACTGCAAGGACGCTTC AAGGCGCTGCCCGGCGGGGTCGCCTACGGCACCCTGGACAGTAGCGCGCAGCGCCTGCAGCGGCGCCAGGCGCTGAAACTGCTGTCGCTGCTGGTGGCCG GCGGCGCCGTGGCCTGGGTTGGTCGCGATAGCCTGCCCTGGCAGCGCCTGAGCGCCGACTACAGCACCGCCACCGGCGAGCGGCGCAGTATCGAGCTGGT CGACGGCACCCGCCTGCAACTGAACACCGACAGCGCGGTCGACGTGCGCTACGACGCCGGCCAGCGCCTGATCCTCCTCGCCCGCGGCGAGATCTTCCTC
Amino Acid Sequence
>RNA polymerase sigma factor
MSAPILLSAHHRAMHALYSEHHGWLQNWLRGKLGCAADAADLAQDTFLRILLKRELREIGMPRAFLRTIARGLVIDHWRREELQRAYLESIAHLPEAQAP SPEARELVLELLEEISRMLDGLKPKVRTAFLLAQCEDLSHRQIAERMGVSQRSVERYVAEALYHCYLLRYGE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site