Strain | Pseudomonas aeruginosa strain AZPAE14550 AZPAE14550_contig_26, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCGACACCGGCGCCGACATGCACGACAAGTACAAGGAAACCTCGCGCGGGGGCCTGGCGGTGAACGCCATCGAGTGCTGAACCGGAATTGCTCACGAAA CGATCGAGACGCCACTTTTTGGCGCATATGACGCGTGACCGGGCGGTCGCCATCCGTCACACTGCGGGGTAACGGCTCGCCGCCCGTCGTTACCTTTGTC GCCACGGCCGCTGCCCCGCCTTCTCACCGGGGGCCGCCCTGGTGCTACCGAAATGCCCAGGCGCGCGGCGCGCCGCCAGCCGTCGCCCATGCTGTCGTTG TGCCAGGCCCGAGTGGAAATGCCGGGCTAAAGCCTTCCGGCTTTTTTGATTGAACGCCCAATCAATATAGGCATGGCATTTGCCTTGCTCTGGTTACAAG CAACGCCGACGGCGTGGCCCAAGCAGCCACCCGGAAATTCCAACAATCATAAAAAAAGCCTCGTGAGAGGCCTGCTTGCTCAGCGTGAGGAGATACACCC
|
|
DNA Sequence for Gene |
>NQ79_RS26960
ATGACCACGTACGCGCCCGGAGTTCCGCCACAGAACCGAAATCCGCAGTCCATCGGCTTCCTGCTGCTGGATAACTTCACCCTGATCTCCCTGGCCTCGG CGGTGGAACCGTTGCGCATGGCCAACCAGCTCTCGGGACGCGAACTCTACCGCTGGCATACGCTGAGCCTGGACAGCCGCCAGGTCTGGGCCAGCGACGG CCTGCAGATCACCCCCGACGCCGGTACCGACAACGCCCCGGCGGTGGATTGCGTGATCGTCTGCGGCGGCGTCGGCATCCAGCGCAGCGTCACCCGCGAG CACGTCACGTTCCTCCAGGCCCAGGCCCGCCAGGGTCGGCGCCTCGGCGCAGTGTGCACCGGCAGTTGGGCGCTGGCCCGCGCCGGCCTGCTCGACGGCT ACGATTGCAGCGTGCACTGGGAATGCCTGGCGGCGATGCAGGAAGCCTTCCCCCGGGTGGCCATGAGCACCCGCCTGTTCTCCATCGACCGCAACCGCTT CACCTCTTCCGGCGGCACCGCGCCGATGGACATGATGCTGCACCTGATCGGCCGCGAGCATGGCCGCGAGCTGTCGGCGGCGATCTCCGAGATGTTCATC TACGAGCGCATCCGCAACGAGCAGGACCACCAGCGCGTGCCGCTCAAGCACATGCTCGGCACCAACCAGCCGAAGTTGCAGGAGATCGTCGCGCTGATGG AGGCCAACCTGGAGGAACCGATCGACCTCGACGAACTGGCGGTCTACGTCAACGTCTCGCGTCGCCAGCTCGAGCGGCTGTTCCAGAAGTACCTGCACTG CTCGCCGTCGCGCTACTACCTGAAGCTGCGCCTGATCCGCGCCCGCCAGTTGCTCAAGCAGACGTCCATGTCGATCATCGAGGTGGCCTCGGTCTGCGGC TTCGTCTCCACCCCGCACTTCTCCAAGTGCTACCGCGAGTACTTCGGCATCCCGCCGCGCGACGAGCGCCAGGGTCAGCCGCTGGGCCAGCCGGTGGTGC TGATGCCGATCCCGCAGGACCTGGCGCTGATGCCCAACTCCTCGGCGCTGTCGGCCCTGAGCCAGGCGCAGGGCGAGTCGACCTTCGCCAGCGTGCGGAT CTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CGGCGCGTCCCTGCCCGCCCCGTCCACGGGGGCGGGCAGGGCCTTGTCAGCCCCGCGGCACCAGCGCCGGCAGCAGTTGCCGGGAAATCGCCTCGCGCAC CGCCGGCAGCAGCGTGGCGTGCCCGCCGAGCATGTCCTCCACCAGCCGCCGCAGCGCCTGGGCGCGCTCCGGGCTGAGGCCGCGCACGGCGTATTCGCAG GCCTGCTCCGGAGTCGAGTCCGGCGGCACGCTGAAGCCCAGCGCCTGCAGGCGTTCGCGGAAATCGTCCTGGTCGATCAGATCGGCGTGCATCATCGCGG CAGCTCCTTCGATGGGGATTGCCATCGATTCTGCTGAGCCCACGTCGCTCCCGGCAAGGGGGCTGTCCCGCCTGGACATGGGCAGGTCGTTTTCGGCTAA TTCGACCGTCAGCGACACCGCCACAATCACCTCCAGCGGCTTGCGGAATGCAGCGGACGGCTTCCGGAAAACGCCAGACTCACACTGAGGGCCGTTCCTG
|
|
Amino Acid Sequence |
>AraC family transcriptional regulator
MTTYAPGVPPQNRNPQSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWHTLSLDSRQVWASDGLQITPDAGTDNAPAVDCVIVCGGVGIQRSVTRE HVTFLQAQARQGRRLGAVCTGSWALARAGLLDGYDCSVHWECLAAMQEAFPRVAMSTRLFSIDRNRFTSSGGTAPMDMMLHLIGREHGRELSAAISEMFI YERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVNVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTSMSIIEVASVCG FVSTPHFSKCYREYFGIPPRDERQGQPLGQPVVLMPIPQDLALMPNSSALSALSQAQGESTFASVRI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|