Pseudomonas aeruginosa AZPAE14550, NQ79_RS21865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14550 AZPAE14550_contig_17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCATTCTCGATTTCGGCAGCGACATCAAAGGCGACAGCCTGCTCGTCGGCTACGAAAACAAGATCGAAATCATGTCCTACAGCCACAACGTGGCGATGCA GGTCACCAACGACGTCAGCAACTCGGAGCGCACCTCCGGCAAACCCCACGTCGGCGAATTCACCCTCACCAAGTTCATCGACACCTCGACCCCGACCCTC AACGAGTATTGCTGCGCCGGCAAGCCGATCGCCGAGGCGACCATCACCATCGGCCGCAACGCCGCCGAGGGCAACGGGCAGATCATGCCCTTCATCGTCT ACACCCTGAACAACGTGGTGCTCTCCAACGTCAGCGTCAGCGGCGGCGCCGGCGGCAAGCCGGTGGAGACCCTGTCGCTGAACTTCACCAAGATCAAGTG GGAGCTGACCGCGCAGAAGGACGACGGCACCAAGGAAGGCACGGCCGCCTCAACCTGGGACCTGGCCGCCAACCAGCTGGTCAAGTGACCGGGCGCCAAC
DNA Sequence for Gene
>NQ79_RS21865
ATGTCCGGAGCCCTGCCGCCGCTGTTCGAGCGCCTCAGCGCCGAGGCCGACGAACGTCCCGCGTTCGACGACCGGGCGCTGGCCGAGTCGGTCCGCGGCG AGCTGCTGCGCCTGCTCAACACACGGCGCCCGGCGAATGCGCGCAGCGGCATCCTCGCCTACGGGCTCGCCGACTGGACCGCCGTGCAACGCCTGCGCGC CGAGGACCGGCGCCAGCTGGCGCGCGAGGTGCGGGCGGCGGTCGAGCATTTCGAGCCGCGCCTGCAACTGGCCGAGGTCGAGGTCGAACCTGACCCGGGC AATCCGCAGCGCCTGCGTATCCAGCTCGGCGGCAGCCTGCGCAGCGGGTCGCGCCTGACGCCTGCGCTATTCGTCATCGAACAGGGCAGCGATGGCCTTG AGGTGTGCCATGAGCGATTCGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCCGACCTGCTCGACTACTACCAGCGCGAGCTGACCTGGCTACGGCACGCCGGCGGCGCCTTCGCCGAGCGCTATCCGAAGGTCGCCCGGCGCCTGCAA CTGGCTCCCGGCGAATGCCCCGACCCGCACGTCGAGCGTCTGCTGGAAGGTTTCTCGCTGCTCACCGCGCGCCTGCAACGGCGCCTCGACGACGACTACG CAGAGTTCAGCGACGCCCTCCTCGAACAGCTCTACCCCCTGGCGCTGCGCCCGCTGCCGTCCTGCGCGATCGTCCAGTTCGAACCGGACCCGACCCAGGG CAGCCTCGCCGAGGGCTACCGGCTGCCACGCGACACCGCGCTGTTCGTCACCACCCGTGGCGGCGACAGCGTGCATTTCCGCAGCAGCGCCGAGGCGACC CTGTGGCCGCTGGCGATCGACGAGGCGAACCTCCTCGGCGGCGAGGAGGCGCAAGCCCTGACCGGAGTCGGCGCCGCCCGCTCGGCGTTGCGCCTGAGCC
Amino Acid Sequence
>type VI secretion protein
MSGALPPLFERLSAEADERPAFDDRALAESVRGELLRLLNTRRPANARSGILAYGLADWTAVQRLRAEDRRQLAREVRAAVEHFEPRLQLAEVEVEPDPG NPQRLRIQLGGSLRSGSRLTPALFVIEQGSDGLEVCHERFD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site