Strain | Pseudomonas aeruginosa strain AZPAE14550 AZPAE14550_contig_17, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCAGTCATATCCGTGCTCAGGTGGCGGAGAAACCTGTTCGCCATGGCCTCACGGCGGATGAGCTGATTGGTGTGTTCGAAACCGTGGCGACCTTGCGCA AGCTCTGCTGGGATGCCGCCGAACTCGCAGGACTCGTTGCCGGGGCTCATTGCTGGTGGGTCGAAGGGCGCGAGGCGGAGGCGCGGCAGTTCCAGGCGCA GATGTCTTTCACCTTGGCGCGAGAAACCTTCTGCCAGGCCGAGCACGACACGATCATGCAGGACGAGCGCCTGTTGCAGGAGCTTGACGAGGCTAGCGAG CGGTCTTTGAAGCAACGTACGTAGCGCGTCGACAAACGAGGGCCGGGCCGGGTTTTACCTACAGGTAAACCCGGCCCGGGTATGTCCGGGGTAACGAAAT ACGGCAGTTGAGTTTTTTTTCCGGTTTTTCCTGCTGAGACGTCTTTGTAATTGATAAGTATTCTTAAATATTTATCCATACGAAATATATGGAGAAAAAC
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DNA Sequence for Gene |
>NQ79_RS21710
ATGCCAACAGCACATGCGGTTTCCCCTCTGGCAAGGGCTTTAGGAAGTTTGGGGGCAAACAAGATGTCCAGGCTTGGCCTGGCCCTTCTGCTGGCGAGCG CCCAGGCGGTCGCGCAGGAGTACGAATTCAACGTTCCCGCCCAGCGGCTCGACGCGGCGCTTCAGGCGCTTGGCCGCCAGGCGGGTCTGCAGGTGCTCTA CAACCCGAGCGACCTGAGTGGTCTGCGTAGCCGCAGTGTCAGCGGCAAACTCGAATTGGAACAGGCGATCAGCCAACTGCTGGATGGGGCCAACGGTATC GGTTTCGAACTGCAGGGCAAAACCCTGATCCTACGCCTGCAGGACTCCTCTTCGGTGATATCCCTGGATTCAATGGTGGTCTCAGGCCTGGCGCTGAATC CCACTACTGAAAACAGCGGCTCCTATGCCTCGCCTGCGGTGTCGATCGGCAAGGGCAACAAGAGCATCAAGGAAATTCCCCAATCGGTGACGGTGGTCAC CCAGAAGCGGATGCAGGACCAGAACATGTCCACCGTATCCGATGTCCTGGCCAACGCGCCGGGCGTTACCTCCATCCCGATGTTCGGTACCGGCGAGCAG TACTACTCTCGCGGTTTCTTCATCGAAAACTTCCAGTACGACGGTGTACCCCTGGAGCGCCAATCCTATGCCCGTGGTTCGGACTTCACCGGGCAGACCG CGATCTTCGATCGGGTAGAGATTCTCCGGGGTGCGCAAGGTCTGCTGGAGGGCGGCGGCAATCCCTCGGGCTCGGTCAACTTCGTGCGCAAGCGACCGAC GGCGGAGAACCAGGTCCGGCTGACTGCCAAGGCCGGCTCCTGGGATCACTATGGTACCCAGGCCGATATCTCCGGCCCGATCGACGAACAGGGAAGACTG CGAGGGCGCCTAGTTCTCGACTACGACACCAAGAACTCGTTCGTCGACCACGTAGGCGATGACCGCCAGACCATCTATGCCGCGCTCGATTACGATCTTA CGGAAGCTACACGCCTCGGCTTCGGCTTCAGTCGCGAGCGGATCGACGCCAACATCGATGTCAACGGCTTGCCCAACTATACCGATGGTTCGATGCCGCA TTTCAGTCGCTCGACTTTCCTCGGCGGCGACTGGTCCTACTGGGACAAGATCCAAGAGACCTTCTACTTCGATATTGCCCACCAGTTCAACGAAGACTGG TCGTTGAATGCCACGGTGGTCAATGCGCGCGAGAAGAACGACTACAAGTACCTGCTGATGGCCGGCAGCATCAATCCGGACAATACCAGTACGCTGCGGG GAGATGCCTACGTCTTCGACTTCTTTTCCGAGCACTGGGGCGGGGATGTCTATGTCAATGGTCGTACCAAGGTTGCCGATCGCCAGCTGAACCTTACATT CGGGGCGAACTATTCGGACCTGGACAGCAGCGATACCTTCGGCTGGAGGCAGCGCTACGTACCCAACTGGGATATCTTCAACTCGCCGGTCAATACCAAC AAACCATCCGATGACGACATCTATTCCGTCAGGCGCAGCGACGATGGCTACGCTTCGATCCAGAAAGGCGTCTACGGCATGGGGCAATACTATCTGACCG ACGACCTGTCCGTAGTGCTCGGGACTCGCATTTCGTCCTACCAGAAGGCTTATACCTCCAATGGGCCTTGGGGGTATTCGAAGGCGGTGGCCAAGGAGTC GGCGAAGGCCATTCCCTATGCCGGCATCATCTACGACCTCAATCCGGAGTGGAGTGCGTATGCCAGCTTCACCAAGATCTTCCTTCCGCAGTCGGTGCGT ACCGCGAGCGGCAGCATCCTGGGACCGAAAAGCGGGAAAAGCGTCGAGACCGGTCTGAAAGGCATCCTCAACGATGGCCGCTTGAATGCCACCTTCGCGC TGTTCCGCATGGAACAGGACAACATCCCGATCCAGGACGCCAACCTGCCCGATGACGTTCAGGAAGCCAACTGCGGCGGTACCTGCTACCACGGCGGCGG CAAGGCTATCAGCCGCGGCTTCGAGACCGAGCTCAGCGGCGAGTTGTTCGACAACGTGCAGGTATATGCCGCCTACACCCTCAACCTGCTGCGTTACCAG GGCGAGGTGCCCAGCGAAGCGGATGACGTTGGCGCCAGCGTCAATACACCGAAGCACATATTCCGCTCCTGGGTCGACTACCGGTTGCCGGGCAATTGGT CGCGGGTATCCGTCGGCGGCGGCGTCAATGCACAGAGCCGGTCGGCCGGGTTCGGCTACTACGGACGGGAGCAGAGCGGCTTCGCGGTATGGAACAGTCG CCTGGCCTATCGCTTCACCGAAGAGCTGACCGGTGCGATGAACGTCAACAACATTTTCGACAGGCGCTACTTCAAGTCCGTCGACTATGGCCACAACTAC TTCGGCGATCCGCGCAACGTGCTGTTCACGCTTACCTATAGCTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTGCTGACGGCCGGTCATCGGGCCTGCCGGAACGGGAACTGTACGAATGCCGGCCTTCGGGCCGGCTTTTTTCTATCCGTTCGGAATCCGGGTGACGGC CAGCAGGGTTGTTGGCGATTCTCGTCGGCTGGTCCGTGACGAGCACGACGGTGCGTCATTGCCGGCAGTGCAGGCACAAAGATAGAGGCGCGCAGCTAAT GTTGGGCGACTGGGCGGCGGCGATGTCTTCAGCACGCTTCGCAGTAGAAGAGAGGGAGTCGAGAGACGCAGAGACGGGCTGGCTGAGCGGGCGATACGAC GTGTGGAAAGGCGGTTTGTCGGGGTGAGCTTCGCTGCTGCCTCACCGCGAGGCGGGAAGGGCGGACGGGACGCCATGGTGTCCCGTCAGGCTGATGTCTA TCAGGCGGGGTGCAGCGCGGGTTCCACAATCTGGCCGGCGTGCATATGTACCAATTTGTCGGCGATGTCGAAGTAACGGTCGTCGTGGGATATGACGATG
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Amino Acid Sequence |
>hypothetical protein
MPTAHAVSPLARALGSLGANKMSRLGLALLLASAQAVAQEYEFNVPAQRLDAALQALGRQAGLQVLYNPSDLSGLRSRSVSGKLELEQAISQLLDGANGI GFELQGKTLILRLQDSSSVISLDSMVVSGLALNPTTENSGSYASPAVSIGKGNKSIKEIPQSVTVVTQKRMQDQNMSTVSDVLANAPGVTSIPMFGTGEQ YYSRGFFIENFQYDGVPLERQSYARGSDFTGQTAIFDRVEILRGAQGLLEGGGNPSGSVNFVRKRPTAENQVRLTAKAGSWDHYGTQADISGPIDEQGRL RGRLVLDYDTKNSFVDHVGDDRQTIYAALDYDLTEATRLGFGFSRERIDANIDVNGLPNYTDGSMPHFSRSTFLGGDWSYWDKIQETFYFDIAHQFNEDW SLNATVVNAREKNDYKYLLMAGSINPDNTSTLRGDAYVFDFFSEHWGGDVYVNGRTKVADRQLNLTFGANYSDLDSSDTFGWRQRYVPNWDIFNSPVNTN KPSDDDIYSVRRSDDGYASIQKGVYGMGQYYLTDDLSVVLGTRISSYQKAYTSNGPWGYSKAVAKESAKAIPYAGIIYDLNPEWSAYASFTKIFLPQSVR TASGSILGPKSGKSVETGLKGILNDGRLNATFALFRMEQDNIPIQDANLPDDVQEANCGGTCYHGGGKAISRGFETELSGELFDNVQVYAAYTLNLLRYQ GEVPSEADDVGASVNTPKHIFRSWVDYRLPGNWSRVSVGGGVNAQSRSAGFGYYGREQSGFAVWNSRLAYRFTEELTGAMNVNNIFDRRYFKSVDYGHNY FGDPRNVLFTLTYSY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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