Strain | Pseudomonas aeruginosa strain AZPAE14550 AZPAE14550_contig_16, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTCGCCCAGGTCAACGAGCGGGTTCGCCAGGAGGCCGGCCTGCGTGGCGTCAGCGTGATGGGCAGCACCCTGGTACTGCTCGCCGCGCGCGGCAACCAG GCGAGCTGCCTGTGGGCCGGCGACAGCCGCCTGTACCGCCTGCGCGGCGGCGTGCTGGAAGCCATCTCGCGGGACCACAGCTACGTCCAGGAGCTGCTCG ACAACGCATTGATCAGCGAGGAAGAGGCGCGCCACCATCCGCGCGCCAACGTGGTCACCCGCGCGGTCGGCGTGCACGAGCAACTGGAACTGTCGGAAGC CGCGCTGCACGTGCTGCCCGGCGACAGCTTCCTGCTCTGCAGCGACGGCCTCAACAAGACCGCCGACGACAGCGAACTGCGCGACGTGCTCAGCCACAGC GATCCCTATGCGGTGGTCCGCAGCCTGGTCCACCTGGGCCTGACCCGCGGCGCCCCGGACAACATCACGGCCCTGGTGGTCAGGGCCTTCTGAGACGGAC
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DNA Sequence for Gene |
>NQ79_RS20495
ATGGACATAGAACTTCCGGGATTCGACATCGAACGCGAGCTGGGCGAAGGCGCCATGGCCACGGTCTACCTGGCCACCCAGCGCTCGCTGCAGCGCAAGG TGGCGCTGAAGGTGATGGCCGCGGCGCTGGCCGCCGACCCGAGCTTCGCCGAACGCTTCCTGCGCGAAGGTCGGACCCTGGCGCGGCTGTCGCACCCGAA CACGGTGACCATCCACGACATCGGCAACGTCGGCAGTTGCTACTACATGGCCATGGAATACCTGCCCAACGGCACGCTCAAGGAGCGCATCCAGCAGGGC CTCGATCCCGAGCAGGGCCTGGCCTACGTACGGCAGGTGGCCGCCGCGCTCGGCTACGCGCACTCCCAGGGCCTGGTGCATCGCGACGTGAAGCCGGCCA ACATCCTGTTCCGCGCCGACGGCACCGCGGTGCTCTCGGACTTCGGCATCGCCAAGTCGATCGAGGACAATACCCAGTTCACCCAGGTCGGCTTCGCCGT CGGCACCCCCAGCTACATGAGCCCGGAGCAGGCCCGCGGGCAGGAGATCGACGGCCGCGCCGACCTCTACGCGCTGGGCGTGGTGCTCTACGAGATCCTC ACCGGCAAGCTGCCCTACAACGGCAAGGACTCGCTCTCCACCGCCCTGGCCCACCTCACCGAGCCGCTGCCGGAACTGCCGATCGAGCAGGGCCGCTACC AGGACATCCTGCGCCAGTTGCTGGCCAAGGACCCGGCCGAGCGCTTCCCCACTGCCGGCGCGCTGATCGCCGCCCTCGACCGCCTGGCGCCGAGCGCCCT GGAAGCCACCCAGATCCGTCCGCTGGCGACGCCGCAGGACTCGCCGCGAGCGAGCAACCCGCCGCCGGCCGAACCCGCGCCCCTGCCGCCCGCCGACCTC GGCGGCCTGCAACCGGTGTCGATCCAGTTGCCGCCGGTCACGCCCAGCGCCGGCGGCGCCACGCCGCCTCCGCCTCCGCCGTCGCAAGCGGCGAAACCGC CATCGCCCCCGCCGCCTCCGTTGCCGCCGGCGAAGCCACGTGCCGGCGGCAGCCGCACGCCGTTGATCGCCGCCGCCGCGGCCGCCGTGCTCCTGGCGAT CGGCGGCGGCGCCTGGTGGCTGCTGGGCTCGGACGACGCACCGAGCCCTGTCGATCCAGCGCCGCTGGGACAGACGCCGACGGACAAGCCGCAGCAGCAG ACCCCGGTGGCCGATGCCGAACAGGACGGCGGCGACCGTCCGCTGCTGATGCCGGGCAAGAAGACGCTGTTCCAGCGCGTCCTGACCAAGCCCGGCGCGG CCATCTCCGCCGAGGCCGGTGGCCCGCCCCGGGCCGGCGCGGTGCCGGCCTTCTCGGTGCTCTACGTATACGCCCGCAAGCAGGTCGGCGGCAGCCCCTG GCTGCGCGTCGGCGCCTCCAGCAACGGCGAGGGCGACGGCTGGCTGCCGGCCAGCGCGGTGAGCGACTGGAAGCAGAGCCTGGTGCTGAAGTTCACCGAA CGCTCCGGCCGCGCGCCGGTGATGTTCCTCAACAGCGCCGAGCAGGTCGAGCGCCTGCTCGGCGATACCCGCGCAGCGCGCGACACCCTGACCCAGGCGG TGGATCACAAGGGCGATCCGCAGGTGGTCGCGGTCGAGCCCAACGACCGGGCGATCCCCCAGGACCAGTTCTACCTGCTGCCGATCTTCGACTCGAAGGA AAGCTTCGACGCCGACGGCCAGCCGGCGCAGTTGCTGGAGGTCGCCTCGATCGACCCCGGCGGCAGCGCCGCGGCGCCCCAGGCGCCGGGCCAGGCCGGG CAGGGCGGCGCCAGCGGCGCGGCGAGCGACACCTTCCGCACCGGCATCGTCCTGGTGGTGGACACCTCGGTGTCGATGCAGCCCTACATCGACCGCGTGC GCGAGGTGATCGACGGCCTGCAGCGGCAGATCGGCGAGCGCGGCGACCTGGACAAGGTCAGCTTCGGCCTGGTCGGTTTCCGCAACAACACCGACAAGAC CCCCGGCCTGGAATACGTCAGCAAGACCCTGGTGCCGCTGCAACCGGGCAACGACGCGCAGCGCTTCGCCGAGTTGAGCAGCCAGGTGCGCGCCACCGAC GTCTCCAGCCACTCGTTCAACGAAGACGCCTTCGCCGGGATCATGCAGGCGGTCGACGAAATGGACTGGTCGCCCTACGCCGGGCGCGTGGTGCTGCTGG TCACCGACGCCGGCGCGCTGCGCAAGAACGACCCGCTCGGGCGCACCCAGATGAACGAGGCCGAGGTCCGCCAGGCGGCGCTGCGCAAGGGCGTGAAGAT CTATGCCCTGCACCTGCGCACCCCGGCCGGGAAGAACAACCACGGCTACGCCGAGCAGCAGTACCGCAGCCTCACCGCCGACGCCAACCCGAAGATCGCC GACCTCTACATCCCGGTGGCCGGCGGCGAGGTGAACGCCTTCGGCAACACGGTGAAGGAGATCGGCACGGTGTTCGCCGACCTGGTCCACGACGCCGGCA ACCGCAAGCCGCAGGCGCCGCGCTTCGACGCCGCGCCAAGCGTGGCGAGCAAGTCGGCGGCCATCGGCTACGCCATGCAGATGGAATTCCTCGGTCGCCG CGACCCGGTGCGCGCGCCGCAGGTCGTCACCGCCTGGACCGCCGACCGTGACCTGACCAACCCGGCGCTGCCGGCGTTCCAGGTCTGCGTGCTGCTGAGC AAGCTGCAACTCAACGAACTGCAACAGTCGCTGAAACTGATCGTCGACGCGGCCAAGCGTACCCAGACCTCGCCCAAGGACTTCTTCCAGGAAATCGCCA GCGCCAGTGCCTACATGAGCCGCGACCCGGCGCAACTGGTGAAGGGCAGCAACCTGGCACAGAGCGGCGTGCTCGGCGAATACCTGGAAGGCCTGCCGTA CCGCAGCAAGTCGCTGAACATGACCCAGGACCTCTGGCTGTCGCTGAGCGTCGCCGAACAGCAGGACTTCATCGACGAACTGGAGTCGAAGATCCGCCTC TACGAAACCTTCCACAACGACGTCGCCAACTGGGTCCGGTTCGGCGACGCCGACGCCGGCGACGCGCTGTACCGCGTGCCGCTGTCGACGCTGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCTGCGCCTGCACGAGGTCGCCCGCAGCCACGGCGCCGGTCGCCAGCGCTACCGCCTGCGGGTGCCGGCGCTGGAATTGCGCGCGGGTCGCCAGCTGGC CATCGTCGGCCCCAGCGGCTGCGGCAAGAGCACCCTGCTCGACCTGCTGGCGCTGGCCCTGGCGCCGGACCCGGGCGGGCGCTTCGAATTCCTCGCCGGG GAACGCCCGCAGGACATCGCCGCGCTCTGGCGCGACGGCCGCCAGGACCGCTTGGCGGCTCTGCGCCGGCAGCACTGCGGCTACGTGCTGCAAAGCGGCG GGTTGCTCGAGTTCCTCGATGTGCGGCGCAACATCGGCCTGCCCTGCGCGTTGCTCGGCGCCCCGTCCGCCGAGCGCGTGCAGGCGCTGGCCGAGCGGCT GGAAATCGGCGACCAGCTGGACAAGAAACCGGCGGCGCTGTCGGTCGGCCAGCGCCAGCGGGTCGCCATCGCCCGCGCCCTGGCGCATGCGCCACGCCTG
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Amino Acid Sequence |
>serine/threonine protein kinase PpkA
MDIELPGFDIERELGEGAMATVYLATQRSLQRKVALKVMAAALAADPSFAERFLREGRTLARLSHPNTVTIHDIGNVGSCYYMAMEYLPNGTLKERIQQG LDPEQGLAYVRQVAAALGYAHSQGLVHRDVKPANILFRADGTAVLSDFGIAKSIEDNTQFTQVGFAVGTPSYMSPEQARGQEIDGRADLYALGVVLYEIL TGKLPYNGKDSLSTALAHLTEPLPELPIEQGRYQDILRQLLAKDPAERFPTAGALIAALDRLAPSALEATQIRPLATPQDSPRASNPPPAEPAPLPPADL GGLQPVSIQLPPVTPSAGGATPPPPPPSQAAKPPSPPPPPLPPAKPRAGGSRTPLIAAAAAAVLLAIGGGAWWLLGSDDAPSPVDPAPLGQTPTDKPQQQ TPVADAEQDGGDRPLLMPGKKTLFQRVLTKPGAAISAEAGGPPRAGAVPAFSVLYVYARKQVGGSPWLRVGASSNGEGDGWLPASAVSDWKQSLVLKFTE RSGRAPVMFLNSAEQVERLLGDTRAARDTLTQAVDHKGDPQVVAVEPNDRAIPQDQFYLLPIFDSKESFDADGQPAQLLEVASIDPGGSAAAPQAPGQAG QGGASGAASDTFRTGIVLVVDTSVSMQPYIDRVREVIDGLQRQIGERGDLDKVSFGLVGFRNNTDKTPGLEYVSKTLVPLQPGNDAQRFAELSSQVRATD VSSHSFNEDAFAGIMQAVDEMDWSPYAGRVVLLVTDAGALRKNDPLGRTQMNEAEVRQAALRKGVKIYALHLRTPAGKNNHGYAEQQYRSLTADANPKIA DLYIPVAGGEVNAFGNTVKEIGTVFADLVHDAGNRKPQAPRFDAAPSVASKSAAIGYAMQMEFLGRRDPVRAPQVVTAWTADRDLTNPALPAFQVCVLLS KLQLNELQQSLKLIVDAAKRTQTSPKDFFQEIASASAYMSRDPAQLVKGSNLAQSGVLGEYLEGLPYRSKSLNMTQDLWLSLSVAEQQDFIDELESKIRL YETFHNDVANWVRFGDADAGDALYRVPLSTLP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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