Pseudomonas aeruginosa AZPAE14557, NQ81_RS07735

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14557 AZPAE14557_contig_7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCAACCTGCTCGAGATCGATGCGCAGAACCTGGCCAAGGTCATGGCCGTGGTCCAGCGCCTGACCCGGGCCCTGGTCGAGGAGGTGCAGCCGGACGGCGT GCAGGTCGCCCAGTTCAACGGCGCCCCCGCCGGGCAGACGGTCTTCCACATCCATTTCCACGTCATCCCGCGCTTCAGCGGCGAGAATCTCGGCATCCAT GCGGCGAAGCAGGGCGACCCGGAAGTGCTCGCACAACTTCAGGAGCGTTTGGCGCAGCGTCTGCAAGGCTGATTGCGCATGGGCCGGCCCGGTTCGGGGG CGGTCCTTCGCTCGTCGGATTTTTCTGAAATATTTTGTTACATACTGTCGAGGGTCAGGCGCGCCGCGGTTTTCCGGCGATGTGCGCAACAATTTGCACA GTTTTTTTGACGTAGCATCCGCGACATCCCGCTCTTCGGAGCGACCACGGCGAACAGGGACGCCAGCCGTGCAGGTTTTTCGAGCAACAGGGGACAGCGG
DNA Sequence for Gene
>NQ81_RS07735
ATGTTCAACCCGGCCAACCAGACCCACTTCAGCCTCACCCTCGACGGCCTCCGCCACGACCTGCAGGTCCTCGCCTTCAACGGCCACGAAGGCATCAGTC GCCCCTACCGTTTCGAACTCGAACTGGTCGGAGAGCGCGCCGGCCTCGACCTCGAAACGTTCCTCCACCGGCCCGCCTTCCTCTCCTTCACCCCGCAGGG CCAGGGTGTCCACGGCCTGGTCTACGGCGCTGCCCAGGGCGATGCCGGCAAGCGCCTGACCCGCTATCGCCTCACCCTCGTCCCGCACCTGGCCTACCTC GCCCAGCGCAACAACCAGCGGATCTTCCAGCACCTCACGGTGCCGCAGATCGTCGCCCTGATCCTCGAGGAGCACGGCATCCTCGCCGACGCCTACCGCT TCCAGCTCGGCACCCGGTATCCCGAGCGCGAATACTGCGTGCAGTACGACGAAAGCGACCTGCATTTCGTCCAGCGCCTCTGTGCCGAAGAGGGCATCCA TTTCCATTTCCGGCACAGCGCCGAGGCGCACCTGCTGGTGTTCGGCGACGACCAGACGGTGTTCCCTCGCCTGGGCCGTCCCACCGCCTACGTGCACGAC AGCGGGCTGGTCGCCGACGAACCGGTGATCAAGCGCTTCAGCCTGCGCCTGGCCAGCCGCACCACGCGCACCACCCGCCGCGACTACGACTTCGAGAAGC CGCGGCTGCTGCTGGAGGCCGGCAACCGCCCCGCTGCCGACGCCCCGGCCGAGCCGGACCTGGAGGACTACGACTACCCCGGTCGCTTCGTCGATCGCCA GCGCGGCAAGCTGCTCAGCCAGCGCGCCCTGGAGCGCCACCGCGCCGACCGGCGCCTGGGCGAAGGGGTCAGCGACCAGCCGCTGCTGGTCAGCGGGCAC TTCCTGGAGATCGCCGAGCACCCGCGCGCGGAGTGGAACGACCTGTGGCTGCTCAGCGAAGTCTTCCACGAAGGCAAGCAGCCGCAGGTGCTGGAAGAGA ACGTTACCTCCGACACGTCGGCCAGCACGGACGACTTCCAGCAGGGCTACCGCAACCGCTTCCTCGCGACGCCCTGGGAGGTGTTCTTCCGCCCGCCGCT GGAGCACCCGAAGCCGCGCGTGCTGGGCAGCCAGACCGCGGTGGTGACCGGCCCGCCAGGCGAGGAAATCCACTGCGACCGCTACGGCCGGGTCAGGGTG CAGTTCCACTGGGACCGCGAGGGCCAGGGCGACGATAAGAGCAGTTGCTGGCTGCGCGTAGCCAGCGGTTGGGCCGGCAACGGCTATGGCGGCATCGTAA TTCCGCGGGTCGGCATGGAAGTGCTGGTGGACTTCCTCGAAGGCGATCCCGACCAGCCGCTGGTCAGCGGCTGCGTCTACCACGCCGCCCACCCGGTGCC CTACGAGTTGCCGGCGAACCAGACCCGCAGCGTCTTCAAGAGCCTCAGCAGCCCTGGCGGCGGTGGCTACAACGAGCTGCGCATCGAGGATCGCAAGGGC CAGGAACAGATCTTCGTCCATGCCCAGCGCGACTGGGACGAGAACATCGAGCATGACCAGAAGATCCGCGTCGGCCACGAACGCCACGACACCGTGGAGG CGAACAGCTACAGCGAGTTCAAGGCCGAGGAGCATCACACCGTGCACGGAGAGCGCAAGGTCGAGCTGAAGGCCGATGACCACCTGACGGTCGGCGACAG CCAGCACGTGAAGCTCGGTCGTGCCTACCTGGCCAGGGCCGGGCGCGAGATCCACCTGAAGGCCGGGCAGAAGATGGTGATCGAGGCCGACAGCGAACTG ACGGTGAAGGCCGGCGGCAGCTTCATCCGGCTCGACGCAAGCGGCATCGCCATCAGCGGCCCGCTGGCACGGATCAATGCAGGCGGCGCGCCGGGAAGCG GCTCGGGGATCGCGATCAAGATGCCGCGGGTGCCGGGCATGGCCGACCAGGACAGCCCCGGCGCGCCACCCGAGGCGGTCGCGCCCAACCTGCCGCCGCG ACAACCGGTTTGCGAAGAGTGCCTGCTACAGGCGAAGAAAAGAGGCCAGGCGCTCGCCGAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAACCGCGATGACGCCGAACCCCCGCCATTGGGCCCGCGAGCTGTGGCAGCGCTCCCGCGATCGCGGCTTGCAGACCCACATCGATGTATTGGTCGATG CCACCGGGCTGGACGACTATCCCTTGCTCGCCGAGCATGCGCGGCAAAGCGATCCTCCGGCGCTGTTCAAATTGCTGGAGCAAACCCCGGAGGCCGCCCT GGCCGACGAGGGCCCGCTGCTGCTGCGCCTGGAAGACGGCCACGCGGCCTGGCTGGACGAACTGCTCGAACGCATCGACTGCCGCCGCCACCTGATGCTC CTGTTCAGCCCCTGGCCGTTGCCGCGCCTGGGCGAGCACCTGCGCAGCTGCACCCAGGCCGAGTGGAACCAGGGTCGTTCCAGCGGCGTACTGCGTTTCT ACGAGCCGGGCCTGTTCATGGCGGTCAGCGACATGCTCGATCCCCGGCAGAGCCGTTACCTGCATGCCCCGGTTTCCAGCTGGCACTGGCTGGACCGCGA
Amino Acid Sequence
>type IV secretion protein Rhs
MFNPANQTHFSLTLDGLRHDLQVLAFNGHEGISRPYRFELELVGERAGLDLETFLHRPAFLSFTPQGQGVHGLVYGAAQGDAGKRLTRYRLTLVPHLAYL AQRNNQRIFQHLTVPQIVALILEEHGILADAYRFQLGTRYPEREYCVQYDESDLHFVQRLCAEEGIHFHFRHSAEAHLLVFGDDQTVFPRLGRPTAYVHD SGLVADEPVIKRFSLRLASRTTRTTRRDYDFEKPRLLLEAGNRPAADAPAEPDLEDYDYPGRFVDRQRGKLLSQRALERHRADRRLGEGVSDQPLLVSGH FLEIAEHPRAEWNDLWLLSEVFHEGKQPQVLEENVTSDTSASTDDFQQGYRNRFLATPWEVFFRPPLEHPKPRVLGSQTAVVTGPPGEEIHCDRYGRVRV QFHWDREGQGDDKSSCWLRVASGWAGNGYGGIVIPRVGMEVLVDFLEGDPDQPLVSGCVYHAAHPVPYELPANQTRSVFKSLSSPGGGGYNELRIEDRKG QEQIFVHAQRDWDENIEHDQKIRVGHERHDTVEANSYSEFKAEEHHTVHGERKVELKADDHLTVGDSQHVKLGRAYLARAGREIHLKAGQKMVIEADSEL TVKAGGSFIRLDASGIAISGPLARINAGGAPGSGSGIAIKMPRVPGMADQDSPGAPPEAVAPNLPPRQPVCEECLLQAKKRGQALAER
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site