Pseudomonas mendocina NK-01, MDS_1213

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mendocina NK-01 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GGCTATGCCAGCACTTCCCTGGGCAGTCTGTTCGACCCTAGCCGCCAGGTGTGGCGCTTCGCCCCGCAGATTTCCCAGCCGTTGTTCCAGGCTGGGCGCC TGCGCGCCGAACTGCGCCTGGCCAAGGTGCGCAAGTCCGAGGCGGTGGTTCAGTACGAGCGCGCCATCCAGGTTGCCTTCCGCGAAGTGGCTGATGCCCT GGCCGGCGCGGCCACCCTGGATCGGCAGATCGAAGCGCAAACCCGCGTGGTGGCCAGCGCTCAGCGTCGTGTGGCGCTATCCGGCCTGCGCTACCAGGCC GGCGTCGATGGCCGCCTGGAACTGCTCGATGCTCAGCGCGGGCTTTACGCCGCCCAGCAGAGCCTGCTGGAGCTGCGCCGCGACGCAGCTGTCAATAGCG TGGCCTTGTACAAGGCGCTGGGCGGCGGCCTGCGTGAACGTACTATCATCACCGCCGCGAACAGCCCTGCGGCCAACGCCGATCATCGAGAGCAGTAGTC
DNA Sequence for Gene
>MDS_1213
ATGTTGCGTGCTGTACCCAAACGCTGGTTGATTCTCGTCGCCGTGATGCTGGCCTTCATGCCCATCGTCATCGACATGACCATCCTGCATATCGCCGTGC CCTCGCTGACCCAGGCACTCGGCGCGTCGAGCACGGAGATTCTGTGGATCATCGACATCTACCCGCTGCTGATGGCCGGCCTGCTGGTGCCCATGGGCAC CCTGGCCGACCGGGTAGGCAACCGGCGCATTCTGCTTGCTGGCCTCAGCGTGTTCGGGGTGGCCTCGACGCTGGCGGCGTTCGCGCCCACACCGGCGTTG CTGATCGCCGCACGCATACTGCTGGCCCTTGGCGGATCGATGATCATGCCCTGCGTGCTGGGCATCATCCGTCGCACCTTCGAGGACGAACGCGAGCGGG CCATGGCCCTTGGTCTGTGGGGCACCGTTGGTGCTGCAGGCGCGGCAGTCGGCCCGCTGGTCGGCGGCGCGCTGCTCGAGCATTTCTGGTGGGGCTCGGT GTTCCTGATCAACGTGCCGGTGATGGCGGTGGTGATTCCGGTCGCCTTCGTGCTGCTGCCGCGCATCGAGGAGACCACGCCGGGCAAATGGGCCATCGGC CAGGCGCTGATCCTGATCGCCGGCATCATCAGTGTTGTCTACGCCCTCAAGGCCGGCGTCGGCGGTACCCAGCCGTTGCCAGTGGCACTGCTCATGCTGA TTGTCGGCCTCGCATTGTTGACCCTGTTCACCCGCCAGCAGTTGCGTGCGGCCGAGCCGATGCTCGATCTGTCGCTGTTCGGCCGCCCGGTGCTGCTGGC CGGGTTGATCATGGCGGTGGTGGCCATCGGCGCCCTGGCCGGCGTGGAACTGACCCTGGCGATGGAGCTGCAGTACGTGCTCGACAAGTCGCCGCTTGAG GCTGGCATCTTCATGATTCCGATCATGGCGGCGGCAGCGGTTGGCGGGCCGTTGGCCGGTTACCTGTCCAACCGCTTCGGCCTGCGCGCGGTGGCCAGCC TGTCGCTGCTGGTTTCCGCTGGCGCCCTGGGCTTCGTGGCGCTCGCCGATCTGCATGAGCCGGGCGTCAGCGTGCCGGTGGTGCTCGCCGTGCTGGGGCT GGCGCTGAGCATCGGTCTGACGGCCTCGTCGATCGCCATCATGGGCGCGGTGGAGGCCAGCAAGGGCGGCGCGGCGGGTGCTCTGGAAGCCACGGCCTAC GAGTTGGGCACCGGACTGGGGATCACCTTTTTCGGTGTGTTTATGTCCAGCGTGTACGGCCACACCATCGCCTTGCCCGCAGAGCTGGCGGCAGCATTGG CCGAGCGTGCGGCGCGTTCGATTGGCGACAGTTACCTGGTGGCCGCCGAGTTGCCGGCCGAGCAGGGCTGTGCGGTGATCGCAGCGGCCAAGGCGGCGTT CTCCAGCACTCATTCGATATTGCTGTGCACCGCGGCCGTGGTGGTCGGTGTGCTGGCCGTCGTGGTGTTCAGGTTGTTCAAGGGGCAGAGCGAGCAAAGC GCGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAAAACGGGCCGCCATTGCGGCGGCCCGGCTGTTCTACCAGCGATAGCTCACCGTGCTCACCACCTGGCGCTCGTCACCGTAGTGACAGGTAGAGAACCC GCACTGGGTGTAGCGCTTGTCGGTCAGGTTGCTGGCGTTGACGGTCAGATCCCAGTGGTCGTCGATCTGGTAGCGCGCCATGGCGTCGAACAGGGTATAG GCTGGCATTGCCGACTCCATAAGTGAGGCCTGCGTTGTACCCATGTAGCGAACGCCGAGGCCCACAGTCAGTTGCGGAATGCCCCAGTTGATGAAGTCGT AGCTGCTCCACAGGGCGGCCTGGTGGTAGGGCGTATCATCGCTACGCTGACCCACTTCGGCGGCAATCGCGCTCTTGGTGGTGCGTGCATCGGTATAGGT ATAGGAGGCGATCACGCTGAGTGCTTGGGTGACATCCGCCTTGGCTTCCAGCTCCAGACCGCGCGAGCGAACCTCGCCAGTTTGTCTCGGATCGTCATTG
Amino Acid Sequence
>major facilitator superfamily transporter
MLRAVPKRWLILVAVMLAFMPIVIDMTILHIAVPSLTQALGASSTEILWIIDIYPLLMAGLLVPMGTLADRVGNRRILLAGLSVFGVASTLAAFAPTPAL LIAARILLALGGSMIMPCVLGIIRRTFEDERERAMALGLWGTVGAAGAAVGPLVGGALLEHFWWGSVFLINVPVMAVVIPVAFVLLPRIEETTPGKWAIG QALILIAGIISVVYALKAGVGGTQPLPVALLMLIVGLALLTLFTRQQLRAAEPMLDLSLFGRPVLLAGLIMAVVAIGALAGVELTLAMELQYVLDKSPLE AGIFMIPIMAAAAVGGPLAGYLSNRFGLRAVASLSLLVSAGALGFVALADLHEPGVSVPVVLAVLGLALSIGLTASSIAIMGAVEASKGGAAGALEATAY ELGTGLGITFFGVFMSSVYGHTIALPAELAAALAERAARSIGDSYLVAAELPAEQGCAVIAAAKAAFSSTHSILLCTAAVVVGVLAVVVFRLFKGQSEQS AH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site