Pseudomonas mendocina NK-01, MDS_1024
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina NK-01 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCAACGCGCCGGCATCGCCCACCAGTGGAGCACGGATATCCTCGCGCGCCTGTGGCGCAAGCTGGCGCTCAATTGCGCGATCAACCCGCTCACTGTGC TGCACGACTGTCGCAATGGCGGCCTGAGCGAACACCCGGCCGAAGTCGCCATCCTGTGCACTGAACTCACGGAGCTGCTGCAGCTCTGTGACCAACCGGC TGCGGCGGACAACCTGCACGAGGAAGTGCAACGGGTGATTCATGCCACCGCGGCAAACTACTCCTCCATGCACCAGGATGTAGCCCTGGGTCGCCGCACC GAGATCAGTTATCTGCTTGGCTACGCCTGTGCCGCTGCGCAGCGCCATGGGTTGCAGTTGCCGCACCTGCAGCATGTGCAACAGCGCTTGCTTGAGCATC TGCAAGCACGTGGCCTGCCAGTGAACTAGCGGGCCAGGCCGTGGCAATGACAGCCCTGGCGCGCTAACCTGCCCGCTCTACTCGCCACAGCGATAAGCTC
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| DNA Sequence for Gene |
>MDS_1024
ATGAGATTGCGTCAGCGCCTCGAAAACCTGCCGGTTGGCCGCAAACTGCTTGCCGCGCTGCTGGTGCTGCTCGCCGCGGTGATGCTGGTGGCCAACCTGG CGTTCATCAGCGCAGCCTACTGGATCACCCAGGAGAGCATGGCGCCACAGGCCCTGCACACTCTGGGTCGACTCATCGCCAGTCCGACACTGAGCAAGGA GGCCCTGCACTCATCAGCCTCGGCCGAGGCCGTGCTCAAGCGCCTGGACGATTATGCGCCGCTGCGTGCAGCGGTCATCTATGACAGCAACGGCAACAGC CTGGCACAACTGCAGCGAGGGGAAAAACTGCAGCTGCCACAACAGCTCAGCCAGCTGCAGAACTGGCGTGACACCGCCTTTCGCACCAACCTGCTGGTTG ACCTGCCGCACCCCAGCGGTCGCCCCGGAGCGCTGCTGCTGGTCGCGTCCAGCGAGCTGCCCAGCGTCTTCTATACCGGCACCCTGACCGCCAGCCTGGT AATCCTGGCGTTCAGTGTGCTGCTCTGGCTGCTGGTGGCCAAACAGATCAAACGCCTGGTAACCAAGCCCATCCGCCGCCTGGAGGAACTGTCCCGCCAG GTTACCCGCGAAGAAAACTATGCGCTGCGCGCCAACCGCGGTCACCAGGATGAAATCGGTAGTCTGGCCGACGCCTTCAATACCATGCTGATGCGCATGG AAGCGCGTGAACAGCAACTCAAACGCGCGCGCGACGACGCCCAGCAGGCCTTCGATCAGGCACAGAGCCTGGCCGAGGAAACCCGCCACTCCAACCGCAA GCTGGAGCTGGAAGTCCAGGTGCGCAGCAAGATCGAGAAGAAGCTCACCGGCTTCCAGAATTACCTCAACAGCATCATCGACTCCATGCCTTCGGCGCTG ATTGCCCTCGACGAGCAGCTGTACGTAACGCAGTGGAATCAGGAGGCCAGCACGCTATCCGGCACGCGCCTGGAAGAGGCTCTGAACCAGCCAGTGTTCC TCGCCTTTCCACCACTCAAGCCGTTCCTCCCCCAACTCAAGCGCACCGCCGAACAGCACAGGGTGGAAAAGATCGAGCGCGTAACCTGGCACAAGGACGA AGAACCCCATCACTACGCCCTGACCTTCTACCCACTGATGGGTGGTGCCGGGCGCGGTGTGGTGATCCGCATCGACGACATCACCCAGCGCCTGGCTCTC GAAGAAATGATGGTGCAGTCGGAAAAGATGCTCTCGGTCGGCGGCCTGGCCGCAGGCATGGCACACGAGATCAACAACCCGCTCGGCGCCATCCTGCACA ACGTGCAGAACATTCGCCGACGTCTGTCACCGGACCTGGAGAAGAATCTCGAACAGGCCGAACAGGCGGGTGTCAGCCTGGCCGCCATCCAGCACTACAT GGAAGCGCGCGAGATACCGCGCCTGCTCGACGGTATCCAGCAGGCCGGCCAGCGCGCCGCCAAGATCGTCAGCCACATGCTCAGCTTCAGCCGACGCAGT GACCGCCAGCTCTCGCCCTGTGATCTGCCGGCGCTGATCGACCAGGCGCTGGAGATCGCCGGCAATGACTTCGACCTGGCCGACAGCTTCGATTTCAAGA CGCTGGAAATCGTGCGCCAGTTCGACCCGCTGCTGGGGCCGGTAGCCGGTACCGCCAACGAACTGGAGCAGGTGCTGCTCAACCTGCTGAAAAATGCCGC CCAGGCCATCCACCAGCGCGACGAAGAGGCCGAGCCCGGCCGCATCATCCTGCGCACCCGACAAGCCGGCAGCTGGGCAGAAGTGCAGGTGGAAGACAAC GGCACGGGCATGAGCGAAGCCGTGCGCAAGCGCATCTTCGAACCCTTCTTCACCACCAAGGAGGTGGGCCAGGGCACCGGACTCGGCCTGGCGGTCTCCT ATTTCATCGTCACCAACAACCACAAAGGGCAAATGGAGGTGCACTCCACGCCGGGCCAGGGCACCTGTTTCACCCTGCGCCTGCCACTAGCTTCGCTGCC CGAGCACACAGGACTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCATGGGCTTTCGCCTTTCGAAGATCTACACCCGCACCGGCGACAAGGGCGAAACCGGCCTCGCCGATGGCCGTCGAGTCGGCAAGGACCATCCGCGCA TCGAAGCCATCGGTGAACTGGATACGCTAAACAGCCAGCTGGGCCTGCTGCTCGCCGACCTCGATGAAGCCGTAGCGGCCAGCCCCGGCCTCAAGGAAAT CAGCGAGGTGTTGAGCCCCTGCCAGCATCGCCTGTTCGATCTTGGCGGCGAACTGGCGATGCCCGAGTACCGAGCCCTGCAGCCAGAGGAAATCGAACGT CTGGAGGCTGTTATCGATCGCTGGAACGATGAGGTCGGGCCGTTGGAGAACTTCATCCTGCCCGGCGGCTCCAGGCTGATCGCCCAGGCTCATGTCTGCC GCAGCTTTGCCCGCAGCGCCGAGCGCCGTTGCCAGCATCTCAATGCCGTTGAGCCGCTGCGCGCCGAGGGCCTGGCCTACGTCAATCGCCTATCCGACCT
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| Amino Acid Sequence |
>multi-sensor signal transduction histidine kinase
MRLRQRLENLPVGRKLLAALLVLLAAVMLVANLAFISAAYWITQESMAPQALHTLGRLIASPTLSKEALHSSASAEAVLKRLDDYAPLRAAVIYDSNGNS LAQLQRGEKLQLPQQLSQLQNWRDTAFRTNLLVDLPHPSGRPGALLLVASSELPSVFYTGTLTASLVILAFSVLLWLLVAKQIKRLVTKPIRRLEELSRQ VTREENYALRANRGHQDEIGSLADAFNTMLMRMEAREQQLKRARDDAQQAFDQAQSLAEETRHSNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNQEASTLSGTRLEEALNQPVFLAFPPLKPFLPQLKRTAEQHRVEKIERVTWHKDEEPHHYALTFYPLMGGAGRGVVIRIDDITQRLAL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPDLEKNLEQAEQAGVSLAAIQHYMEAREIPRLLDGIQQAGQRAAKIVSHMLSFSRRS DRQLSPCDLPALIDQALEIAGNDFDLADSFDFKTLEIVRQFDPLLGPVAGTANELEQVLLNLLKNAAQAIHQRDEEAEPGRIILRTRQAGSWAEVQVEDN GTGMSEAVRKRIFEPFFTTKEVGQGTGLGLAVSYFIVTNNHKGQMEVHSTPGQGTCFTLRLPLASLPEHTGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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