Pseudomonas aeruginosa AZPAE14557, NQ81_RS20420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14557 AZPAE14557_contig_20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCCGGGTCCGGCAGGACCCAGTCGTTGTCCGGGCCCCGACCGATGGTCAGCTGTCCCTGGTCCAGTACCTTTTCCGAACACTGACCGGGGGTCAGCTT GTGGTAGCTGGTGATGGTCAATCGCAGCGGCATTGCTACTCCTTGCATTGCCAGCGCCCGGCTCTTCCAGGCGCTCACCCCCGTGCCCGAGGGATTTCGG TTCGCATCCAGGCTGGCCCGACGGCTTTCCGGCGTTTCGTCGCCTCGGGAAGACACATCGGGTGATACCGGATTATAAAAGACTAATCCTACGTCTTTTA AAGATTTGTCCGATCTGCGGTGTCATGCAACTAGTGGCGTTGTGCCTTCCTTGACAAGCCTTGCGGCATGCCACAAGAATTTTGCCAACCTTTCGAGTCA TCCGATATTCATCAATGGCTCCTACAAGATCCGACGGAGTGGATCTTACAAGCGAAGGTGAGGGCCGCGCAGCGGCTTCGATGATAGGGAGATCGTCACC
DNA Sequence for Gene
>NQ81_RS20420
GTGCTGGATGTACCCGTTTTGCTGGCTGCCGTATCCCCGGACTCGCCCTGTGGCGACGATCTGGAGTACGACGCCGCGTTCCTCGAACTCGAACGCATCG CCCAGGGCCAACCCGAGCGCCAGATGGGCGATGCCGTGCTGCCCGCCGAACCGCCGGAGTGGCCGCGCGTACGCGCGCTGGCCAGCGAACTGTTCGGCCG TAGCAAGGACCTGCGGGTAGCCAACCTGCTGCTGCAGAGCAACGTCGCCCTCGACGGCCTGGACGGGCTCGCCGACGGCCTGCTGCTGGTCCGCGAGCTG CTCGGCCAGTACTGGGACGGCGTCTATCCGCTGCTCGACGCCGATGACGACAACGACCCCACCTTCCGTATCAACGCCCTCACCGGCCTGGTCGCCGAAC CGCTGCTGCAACTGGTCTGGGCGATCCCGCTGGTGCGCTCGCGGGCGTTCGGCCCGGTCAACCTGCGCGCCGCGCTGAACGCCGCCGGGCTGCAACGCTT CGCCAGCGAGACCCTGAGTCCCGAGCAGATCGCCGGCGCCTTCGCCGATGCCGACGCCGATGCGCTGGCCGCCACCCGGAGCGCCCTGGAAGGCGCCCAG GAACATGCCCTGGCCATCGAGAGCGGCGTCGCCGAACGGGTCGGCTCGGCCCAGGGACTCGACCTCGGTCCCCTTCGTCAACTGCTGCGCCAGGCCCTCC AGGTGTTCGACCTGTACGGCCCGCAGGGCGCCGGCGAGTCCTTGGCGCCGGGTGCCGAGGCGGTCGCCGACGAGCAGGTGGGTGCCGCGCCTGTCGCAGC CGTCGCCGCGCCGGCACCGCGAGCCAGCGGCGAGATCGCCAACCGCGAAGACGTCCTGCGCCAGCTCGATCGCCTGCTCGAGTATTACGTTCGCCACGAG CCGTCGAGTCCGGTGCCGGTGCTGCTCAAGCGCGCCAAGACACTGGTGACGGCCGACTTCGCCGAAATCGTGAGGAATCTCATCCCCGATGGGATTTCCC AGTTCGAAACCCTGCGAGGCCCGGAAAGCGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCCTAGCGGCCGTCCGGGCCAACGCTGCAAGCCGCCGGGGCGATTCCGACGGCGCTAACAACCGCCGTCGCGCGAGGGAGAAACAAGATGGGAAGCACT ACCAGCAGTCAGAAGTTCATCGCCAGGAACCGGGCGCCACGCGTGCAGATCGAGTACGACGTGGAGCTGTACGGTGCCGAGAAGAAGGTCCAGCTGCCCT TCGTCATGGGCGTCATGGCCGACCTCGCCGGCAAGCCCGCCGAACCCCAGGCGGCGGTCGCCGACCGCAAGTTCCTGGAGATCGACGTGGACAACTTCGA TGCCCGGCTGAAGGCGATGAAGCCGCGGGTGGCCTTCAACGTACCGAACGTGCTGACCGGCGAAGGCAACCTGAGCCTGGACATCACCTTCGAGAGCATG GACGACTTCAGCCCCGCCGCGGTGGCGCGCAAGGTCGATTCGCTGAACAAGCTGCTCGAGGCGCGTACCCAGCTGGCCAACCTGCTGACCTACATGGACG
Amino Acid Sequence
>type VI secretion protein ImpA
MLDVPVLLAAVSPDSPCGDDLEYDAAFLELERIAQGQPERQMGDAVLPAEPPEWPRVRALASELFGRSKDLRVANLLLQSNVALDGLDGLADGLLLVREL LGQYWDGVYPLLDADDDNDPTFRINALTGLVAEPLLQLVWAIPLVRSRAFGPVNLRAALNAAGLQRFASETLSPEQIAGAFADADADALAATRSALEGAQ EHALAIESGVAERVGSAQGLDLGPLRQLLRQALQVFDLYGPQGAGESLAPGAEAVADEQVGAAPVAAVAAPAPRASGEIANREDVLRQLDRLLEYYVRHE PSSPVPVLLKRAKTLVTADFAEIVRNLIPDGISQFETLRGPESE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site