Pseudomonas aeruginosa AZPAE14557, NQ81_RS16060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14557 AZPAE14557_contig_15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAACTTTAGCCCTCCTTTCCGTTTTTATCTTTGTTATTGGAAATCAGTCATTTAGGCATTTCTCCGAATCCCCTTCGGAGAGCTACAGACCAGGCTTCAC AAGGCCTGAACCGTTCCTAGGAATAACTCTACAACGATATTGAAGCGGTTAGAAACTGCACGTCACTGGTGCGTTCCACGCACTAATTGAGGTCCTCTTT TTCAATGAAAGTGCAGGACAGAGCGGTTTTTAAAATTAATATGAACATGAACTTCCCGTAATTCGGTACTTGGCGGAAAAAGTCGATTCGAATACGACAT GAACATATCCGTTAGCGACGCCACGTTCGGCGCAAAACCCTGTGACGGATTCGTCATAAGCCAGCGAATGCTCTATCGCGAGACTTGCCGGCAGTAATAA GCGTCGCGCGGCACTCCGGCAAGCGAGCTTTCCTCCCCACGTCATTCCGTTTATTCATATAACGCGTTCCGCCCGCTCCACCCGCGCCAGGAAACCCGCC
|
|
| DNA Sequence for Gene |
>NQ81_RS16060
ATGCTGAACAAACGCCGCCTGCCGTCGATGACCGCCCTGCAATGCTTCGAAGCGGTAGCCCGGCACCTGAGCTTCACCCGCGCCGCCGAAGAGTTGAGCC TGACCCAGAGCGCCATGAGCAAGCAGGTCGCGCAACTCGAGGAGCAACTGCAGCACGCCCTGTTCCGCCGGGTGCGCAAGCGCTTGCAACTGACCCCGGC CGGCGAGCTGTACCTGGCCGAGGTACGACGCATCCTGCAACAGGTAGAGCTGTCCACCCGCTTCCTGCTTTCCTACGGCGGCGAGACCGAAGTGCTGCGA GTGGCGACCCCGCCGACCTTCGGCGCGCGCTGGCTGATCCCGCAACTGAACGGCTGGCGCCACCGCCACCCGAACATCCACCTCGACCTGCGCCAGGAAC TGGAACCGGACGACCTGCGCCAGGGCCATTGCGACCTGGCGTTCTTCTTCGGCCCCGGCACCCTGCCGGGCGCCGAGTGCATCCGCCTGTTCGGCGAACA ACTGGTGGCGGTCTGCGCGCCATCCCTGCTGCCGGCCGGCGGACTGGACGAACCGACCCAACTGGCGGGGCTGGTGCTGCTGCAGAACGCCAGCCGCGCG GAGGCCTGGCACGACTGGTTCGCCAGCCTGGAGCGAAATTGCCAGGGTTGCTACCACGGTCCACGCTTCGACACCTTCTACATGTGCATCCGCGCCGCCC AGGCCGGTTGCGGGGTAGCCTTGCTACCGCGCTTCCTGGTCGAGGAGGAACTCGCCGAAGGCAAGCTGGCGATCGCCTGGCCGCACGCCCTGCCCAGCCA GGAGGCCTACTACCTGGCCTATCCCGAGCATGCCGCGGAAGTCCCCAAGGTGCGCCATTTCATCGAGTGGATGGTAGAGCGCCTGGAGCAGGAGCAACCC TCAGCGGGCCCCCGCCAGACGCGCCACGGCCCGGTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGTTTCCGCTGCGCGGAACCATCTTTACTCTCACTCGGTTCACCTCGGAACGTCCCATGCTCACTGGCGTCACGGTTCGAATCCGCCTGCTGGTCCTGGC GCTGCTACCGCTGACGATGCTCGTCACGGTCATCGCGATGGCGCTGGCCAACGCCAGTCGACTCGATGCCAGCTTCCAGGACCTTTTCAACAACCGGATG AAGCCCATCAGCCAGCTCAAGATCGTCGCCGACGCCGTTGCGGTCAGCGTGGTCGACGCCCTGCACAAATACCGTGCGGGGGTCTTCGATGAAGAGCGCC TGCAGCAGGAGTTAAGTGGGGCGCTGTCGCGCATCGAGAAGTCGTGGGCCGACTATTCCGCAGACCACCGGACTGCCGCCGAGAAGGAAATCATCGAGTC GCTGGTCCCCACCCTGGAACGGGTCAAGCGGATGACCCTGGCATACGACGAGCAGGCCAGGGCCGGAAGCCTGCGAAACGTCGAGGCCGGCACGTTCAAT
|
|
| Amino Acid Sequence |
>LysR family transcriptional regulator
MLNKRRLPSMTALQCFEAVARHLSFTRAAEELSLTQSAMSKQVAQLEEQLQHALFRRVRKRLQLTPAGELYLAEVRRILQQVELSTRFLLSYGGETEVLR VATPPTFGARWLIPQLNGWRHRHPNIHLDLRQELEPDDLRQGHCDLAFFFGPGTLPGAECIRLFGEQLVAVCAPSLLPAGGLDEPTQLAGLVLLQNASRA EAWHDWFASLERNCQGCYHGPRFDTFYMCIRAAQAGCGVALLPRFLVEEELAEGKLAIAWPHALPSQEAYYLAYPEHAAEVPKVRHFIEWMVERLEQEQP SAGPRQTRHGPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|