Strain | Pseudomonas aeruginosa strain AZPAE14557 AZPAE14557_contig_11, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GATCGCCGGCCTGAAGGGCCGCACCTACGGGCACGTCGCGGTGGTCATCAGCGGTCCGCTGTATCGGCAGAAGTACCCGATGTGCTGGTGCGGCAGCATC GCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTATGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCA GTTGCAGCCTGCCCAGGGCCAGTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCGCAGCACGATTCCCCACGAGCATCCCGACTCCACTCGCCC GCCCCTTCGCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTCCGGCCCGCGGATGAACATCT TTCAACTTGAATGAAATTCATGGTCCAGCCACCCCCGGTCGGAAAGCCCCTGCCTTTGTTATGCTTTTCACCTTTCCGCCCACTGACGCCAGGTCCATCC
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DNA Sequence for Gene |
>NQ81_RS12085
ATGTCCAGCCCGCTCACCGATCGCAGCGCCCGCCTGCAAGCCCTCCAGCACGCCCTCAGGGAACGTATCCTGATCCTCGATGGCGGCATGGGCACCATGA TCCAGAGCTACAAGCTGGAAGAGGCCGACTACCGCGGCGAGCGCTTCGCCGACTGGCCGAGCGACGTGAAAGGCAACAACGACCTCTTGCTGCTGAGCCG CCCGGACGTGATCCAGGCCATCGAGAAGGCCTACCTCGACGCCGGCGCCGACATCCTCGAGACCAATACCTTCAACGCCACCCAGGTGTCCCAGGCCGAC TACGGCATGCAGTCGCTGGCCTACGAACTCAACGTCGAAGGGGCGCGCCTGGCTCGCCAGGTGGCGGACGCGAAGACCGCCGAGACCCCGGACAAGCCGC GCTTCGTCGCCGGCGTGCTCGGCCCGACCAGCCGCACCTGCTCGATTTCCCCGGACGTGAACAACCCCGGCTACCGCAACGTCACCTTCGACGAGCTGGT GGAGAACTACGTCGAGGCGACCCGCGGCCTGATCGAGGGCGGCGCCGACCTGATCCTGATCGAGACCATCTTCGACACCCTCAATGCCAAGGCGGCGATA TTCGCCGTCCAGGGCGTGTTCGAGGAACTCGGCGTGGAGCTGCCGATCATGATCTCCGGGACCATCACCGACGCCTCCGGCCGCACCCTGTCGGGCCAGA CCACCGAGGCCTTCTGGAACTCGGTGCGGCATGCCCGGCCGATCTCGGTAGGCCTGAACTGCGCCCTCGGCGCCAAGGAATTGCGGCCGTACATCGAGGA ACTGTCGACCAAGGCCGACACCCATGTCTCGGCCCACCCCAACGCCGGCCTGCCGAACGCCTTCGGCGAATACGACGAATCGCCGGCGGAAATGGCCGTG GTGGTCGAGGAATTCGCCGCCGCCGGCTTCCTCAATATCGTCGGCGGCTGCTGCGGCACCACCCCGGCGCACATCGAGGCGATCGCCAAGGCGGTGGCCA AGTACCCGCCGCGGGCCATCCCGGAGATTCCCCGGGCCTGCCGCCTGTCCGGCCTGGAGCCGTTCACCATCGACCGCAGCTCGCTGTTCGTCAACGTCGG CGAGCGCACCAACATCACCGGCTCGGCCAAGTTCGCCCGGCTGATCCGCGAGGAAAACTACGCGGAAGCCCTCGAGGTCGCCCAGCAGCAGGTGGAAGCC GGCGCCCAGGTGATCGACATCAACATGGACGAAGGCATGCTGGACTCGAAGGCGGCCATGGTCACCTTCCTCAACCTGATCGCCTCCGAGCCCGACATCT CGCGCGTGCCGATCATGATCGACTCCTCCAAGTGGGAAGTGATCGAGGCCGGCCTGAAGTGCATCCAGGGCAAGGGCATCGTCAACTCGATCTCGATGAA GGAAGGCGTCGAGGCCTTCAAGCACCATGCCCGCCTGTGCAAGCGCTACGGCGCCGCGGTGGTGGTGATGGCCTTCGACGAGGACGGCCAGGCCGACACC CAGGCGCGCAAGGAAGAAATCTGCAAGCGCTCCTACGACATCCTGGTCGACGAAGTCGGCTTCCCACCGGAAGACATCATCTTCGATGCGAACATCTTCG CCATCGCCACCGGCATCGAGGAACACAACAACTACGCGGTCGATTTCATCAACGCCTGCGCCTACATCCGCGACAACCTCCCCTACGCCCTCAGCTCGGG CGGGGTGTCCAACGTGTCCTTCTCGTTCCGCGGCAACAACCCGGTACGCGAGGCGATCCACTCGGTGTTTCTCTACTACGCGATCCGCAACGGCCTGACC ATGGGCATCGTCAACGCCGGCCAGCTGGAAATCTACGACGAGATTCCGAAAGCGCTGCGCGACCGGGTCGAGGACGTGGTGCTCAACCGCACGCCCGAGG CCACCGAGGCCCTGCTGGCGATCGCCGACGACTACAAGGGCGGCGGCGCGGTCAAGGAGGCCGAGGACGAGGAATGGCGCAGCTACAGCGTCGAGAAGCG CCTCGAGCATGCGCTGGTCAAGGGCATCACCACCTGGATCGTCGAGGACACCGAGGAATGCCGCCAGCAGTGCGCGCGCCCCATCGAGGTCATCGAAGGT CCGCTGATGTCCGGGATGAACGTGGTCGGCGACCTGTTCGGCGCCGGCAAGATGTTCCTCCCGCAGGTGGTCAAGTCCGCGCGAGTGATGAAGCAGGCGG TAGCCCACCTGATTCCCTTCATCGAGGCGGAGAAAGGCGACAAGCCGGAAGCCAAGGGCAAGATCCTGATGGCCACGGTGAAGGGCGACGTGCACGACAT CGGCAAGAACATCGTCGGCGTGGTGCTCGGCTGCAACGGCTATGACGTGGTCGACCTCGGCGTGATGGTGCCGGCGGAGAAGATCCTGCAGACCGCCATC GCCGAGAAATGCGACATCATCGGCCTGTCCGGCCTGATCACGCCGTCGCTGGACGAGATGGTCCACGTCGCCAAGGAAATGCAGCGGCAGAATTTCCAGT TGCCGCTGATGATCGGCGGCGCCACTACCTCGAAGGCGCATACCGCGGTGAAGATCGATCCGCAGTACAGCAACGACGCGGTGGTCTACGTCACCGACGC CTCGCGCGCGGTAGGCGTGGCCACCAGCCTGCTGTCCAAGGAGCTGAAGGCCGACTACGTGGCCCGCACCCGCGCCGACTACGCGGTGGTCCGCGAACGC ACGGCCAACCGCAGCGCCCGCACCGAGCGGCTGAGCTACGAACAGGCGATCGCCAACAAGCCGGCGTTCGACTGGGCCGGCTACCAGGCGCCGACGCCTT CCTTCACCGGCGTCAGGGTGCTCGACGAGATCGACCTCGCGGTGCTCGCCGAGTACATCGACTGGACGCCGTTCTTCATTTCCTGGGACCTGGCCGGCAA GTACCCGCGCATCCTCACCGACGAGGTGGTCGGCGAGGCCGCCACCTCGTTGTTCAACGACGCCCAGGCGATGCTGAAGAAGCTGATCGACGAGAAGCTG ATCAAGGCCCGCGCGGTGTTCGGCTTCTGGCCGGCCAACCAGGTCGAGCACGACGACCTGGAGGTCTACGGCGCCGATGGCGAGACCCTCGCCACCCTGC ACCACCTGCGGCAGCAGACGATCAAGCCGGACGGCAAGCCGAACCTGTCGCTGGCCGATTTCGTCGCGCCGAAGGAAAGCGGCGTGCGCGACTACATCGG CGGCTTCATCACCACCGCCGGGATCGGCGCCGAGGAAGTGGCCAAGGCGTACGAAGCCAAGGGCGACGACTACAACAGCATCATGGTCAAGGCGCTCGCC GACCGCCTCGCCGAAGCCTGCGCCGAGTGGCTGCACGAGCGGGTGCGCAAGGAGTACTGGGGCTACGCCCGCGACGAGCACCTCGACAACGAGGCCTTGA TCAAGGAGCAATACGTCGGCATCCGCCCGGCACCGGGCTACCCGGCCTGCCCCGACCATACCGAGAAAGGCACTCTGTTCGAACTGCTCGATCCGCAGGG CCTGTCCGGCGTCAGCCTGACCGAGCACTACGCGATGTTCCCGGCCGCGGCGGTCAGCGGTTGGTATTTCGCCCACCCGCAGGCGCAGTACTTCGCGGTC GGCAAGATCGACAAGGACCAGGTGGAACGCTACAGCCAGCGCAAGGGCCAGGAAGCCAGCGTCAGCGAGCGCTGGCTGGCGCCGAACCTTGGCTACGATG ACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCAGGAAGGCGACGATGAAATTCCTCACTCCCGAGCAGATGGAAAAGCCGCGCAAGCGCCGCCTGCGCAAGAAACTGCGCCTGGGCGAGTTCCAGGAGTT CGGCTTCAGCTTCGAACTGACCTACGACCGCAACGCCCTCTCCCACGACGATGCGCTGGACCATCTGATCGACTTCGTCGAGGCCCAGGGCTGGGTGTTC GGCGGTGGCGGCTCGCCGGAACAGGCGGAGATCAGCGGCTACCTGTGCCTGGCGCGGGTCGGCAGCCTGGACGAGGCGGACCGGGAAAGCGCCCGCCTGT GGCTGGAAGCCCAACCCTGGTGCAAGACCTTCGAGGTCGGCCCGTTGAGCGACTGCTGGCACAACTTCTTCGAGTGAAACCGGCGCCGGCACGACCTGGC CTGGCGCCGGCAGGCGCGAAGCTGCGACCTACACCCGGATCAGGCGCGGTTCATGCCCCGTGTGGGCGAGGAAAGCCAGCAGGTCTGCGTAGCGGATGCA
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Amino Acid Sequence |
>B12-dependent methionine synthase
MSSPLTDRSARLQALQHALRERILILDGGMGTMIQSYKLEEADYRGERFADWPSDVKGNNDLLLLSRPDVIQAIEKAYLDAGADILETNTFNATQVSQAD YGMQSLAYELNVEGARLARQVADAKTAETPDKPRFVAGVLGPTSRTCSISPDVNNPGYRNVTFDELVENYVEATRGLIEGGADLILIETIFDTLNAKAAI FAVQGVFEELGVELPIMISGTITDASGRTLSGQTTEAFWNSVRHARPISVGLNCALGAKELRPYIEELSTKADTHVSAHPNAGLPNAFGEYDESPAEMAV VVEEFAAAGFLNIVGGCCGTTPAHIEAIAKAVAKYPPRAIPEIPRACRLSGLEPFTIDRSSLFVNVGERTNITGSAKFARLIREENYAEALEVAQQQVEA GAQVIDINMDEGMLDSKAAMVTFLNLIASEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEAFKHHARLCKRYGAAVVVMAFDEDGQADT QARKEEICKRSYDILVDEVGFPPEDIIFDANIFAIATGIEEHNNYAVDFINACAYIRDNLPYALSSGGVSNVSFSFRGNNPVREAIHSVFLYYAIRNGLT MGIVNAGQLEIYDEIPKALRDRVEDVVLNRTPEATEALLAIADDYKGGGAVKEAEDEEWRSYSVEKRLEHALVKGITTWIVEDTEECRQQCARPIEVIEG PLMSGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDVVDLGVMVPAEKILQTAI AEKCDIIGLSGLITPSLDEMVHVAKEMQRQNFQLPLMIGGATTSKAHTAVKIDPQYSNDAVVYVTDASRAVGVATSLLSKELKADYVARTRADYAVVRER TANRSARTERLSYEQAIANKPAFDWAGYQAPTPSFTGVRVLDEIDLAVLAEYIDWTPFFISWDLAGKYPRILTDEVVGEAATSLFNDAQAMLKKLIDEKL IKARAVFGFWPANQVEHDDLEVYGADGETLATLHHLRQQTIKPDGKPNLSLADFVAPKESGVRDYIGGFITTAGIGAEEVAKAYEAKGDDYNSIMVKALA DRLAEACAEWLHERVRKEYWGYARDEHLDNEALIKEQYVGIRPAPGYPACPDHTEKGTLFELLDPQGLSGVSLTEHYAMFPAAAVSGWYFAHPQAQYFAV GKIDKDQVERYSQRKGQEASVSERWLAPNLGYDD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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