Strain | Pseudomonas aeruginosa strain AZPAE14693 AZPAE14693_contig_33, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCAACGTACCGCTGCTGGCGCACATGCTGTTCTGGTACTTCGCCGCGCCGGAATGGCTACCCGAGGACCTCAAGGCCTGGCTCTACGCCGGCAACATCG AGGCCGCCAGCGCTATCGTCGCGCTGACCCTGTACACCGCCGCGTTCATGAGCGAGGACATGCGCAGCGGCATCCGCGCGGTGCCCACGGTGCAACTGGA GGCCGCCCGCGCGCTGGGCTTCGGCTACCTGGCGAGCATGCGCCTGGTGATCCTCCCGCAGGCCTTGCGGATCACCGTACCGCCGCTGATCTCGCAAACC CTCAACCTGTGGAAGAACACCAGCATCGCCACGGTGATCGGCGTCGCCGAGCTGATGTACCAGGCCGGCCAGGTGGAGAGTTCGACCTTCCGCAGCTTCG AGTCCTTTGCCTTCGCCACCGCGGCCTATCTCAGCGTATCGCTGCTGATCACCGGCGCCGCCGCCTGGTACCAGCAGCGCTATCCGGGAGTCGAACGGCG
|
|
DNA Sequence for Gene |
>NQ90_RS27330
ATGACCACCCTGGAACTGATCGATAGCTACTGGCTGTACTTCCTCGTCGGCCAGTACCCCAACGGGCCGTTGGGCGGGCTGGCCCTGACCCTGGTCCTGG CCTCGCTGGCGCTGCTGCTGGCGCTGCCACTGGGCATCCTGCTCGGCCTGGCGCGGGTCAGCCCCTGGCGCTGGCTGCGCTGGCCGATCACCGCGCTGGT CTTCGTGGTGCGCGGGGTGCCGTTGCTGATGGTGATCTTCTGGGCCTATTTCTTCCTGCCGACCCTCACCGGCCAGCGCACCGACCAGTTCACCACCATG CTGCTGGCGCTTGTGCTGTTCGACGCGGTGTACCTGGCCGAGATCGTCCGCGCCGGCATCCAGGGCCTCGACCGTGGCCAGTTCGAGGCGGCGCGTTCGC TCGGCCTGGGCTACCTGGCGAGCATGCGCCTGGTGATCCTCCCGCAGGCGCTGCGCAACATGCTGCCGTCGTTGGTCAACCAATTCGTCTCGACGATCAA GGAGACCTCCCTGGGCTACATCATCGGCCTGGCCGAAGTCAGCTTCATCGCCTCGCAGATCAATACCCAGGTATTCACCCTGCCGACCCAGGTCTACCTG ATCCTCGGCCTCACCTATTTCATCCTGTGCTTCGGCCTGTCGCGTTTCGCCTTCTGGCTCGAACGCCGCCAGGCGCAGCGTGGCAATCCCAAGGAGGCCC GATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCCGGCTGGAAAAGGTCAACAAATGGTACGGCGCCTACCACGCCCTGGCGGATGTCGACGAACAGGTCGGCCGCGGTGAGGTGGTGGTGGTCTGCGGACC CTCGGGCTCCGGAAAATCCACCCTGATCCGTACCCTGAACCGCCTGGAACCGATCCAGGGCGGGCGCATCCTGATCGATGGCCAGGACATCCACGCTCCC GGCCTGGACCTCAATCGCTTCCGCTCGCACATCGGCTTCGTGTTCCAGCAGTTCAATCTGTTCCCGCACCTGAACGTGCTGGACAACTGCACCCTGGCGC CGCTCCGTTTGTGCGGCCTGAAACCCGCGGAGGCACGCCGCCAGGCCATGGCGCTGCTGGAGCGGGTCGGCCTGGCGGACAAAGCGGCGGCGTTCCCCGC GCGGCTTTCCGGCGGCCAGCAGCAGCGCGTGGCGATCGCCCGCGCGCTGGCGATGGAGCCGCCGCTGATGCTGTTCGACGAACCGACCAGCGCCCTCGAC
|
|
Amino Acid Sequence |
>amino acid ABC transporter permease
MTTLELIDSYWLYFLVGQYPNGPLGGLALTLVLASLALLLALPLGILLGLARVSPWRWLRWPITALVFVVRGVPLLMVIFWAYFFLPTLTGQRTDQFTTM LLALVLFDAVYLAEIVRAGIQGLDRGQFEAARSLGLGYLASMRLVILPQALRNMLPSLVNQFVSTIKETSLGYIIGLAEVSFIASQINTQVFTLPTQVYL ILGLTYFILCFGLSRFAFWLERRQAQRGNPKEAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|