Pseudomonas aeruginosa AZPAE14693, NQ90_RS25925
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14693 AZPAE14693_contig_30, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCAGTTCCAGGCCCTGGATGCGGCTGCCCTCGTCGCCCTTGGCGGTGAGCATGATGATCGGCACCTGGTTGTTCTGTTCGCGCAGGCGGCGGCAGGCA GTGAGGCCGTCCTCGCCGGGAAGCATCAGGTCGAGCACAACCAGCTGGAACAGTTCGCGGGATAGAAGGCGATCCATCTGCTCGGTGTTCTCCACCGCAC GGACGCGGTAGCCCTGCTCGTCGAGGAAACGTTCGAGCAGGCGGCGCAGGCGGGCGTCGTCGTCGACGACGAGGATCTTTTCACCTTCGGCCAGGGCGGC AGGGTTCGACATAGAAACTCCCAGAATGAGTCAGGCGGGCATTATCGCCCAGGTAGCGGCTGGGCCGGACTGTCCATTGTTAGCAGATTTTTCCCCGACC AGCCGCCCTCCAAGGCGAAACTTGGCAGGTATAATGCGGCGCTTTTGCGGCGGGGCGTTGTCTACACGGCCCGTTTTCGTTCGTTTTACCAGGTGGATCA
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| DNA Sequence for Gene |
>NQ90_RS25925
ATGGACAGCATCAACACCCGTATCGCCGAAGAGCTCTCCGCACTGCCCTCCGGCCGCGTTCAACCGCAGCAAGTCGCCGCTGCCGTCGCCCTGCTCGACG AAGGCTCCACCGTTCCCTTCATCGCCCGTTACCGCAAAGAGGTCACCGGCAGCCTCGACGATACCCAGTTGCGCATGCTGGAAGAGCGCCTGCGCTATCT GCGCGAACTGGAAGAACGCCGCGGCGCGATCCTCGCCAGCATCGAGGAACAGGGCAAGCTGACCCCCGAACTGGCCCGCGACATCAAGCTCGCCGACACC AAGACCCGTCTCGAAGACCTCTACCTGCCTTATAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTCGGCGCGCTGGCCGACGCAC TGTTCGACGACCCGACCCTGGTCCCGGAAAGCGAGGCCGCGCGTTTCGTCGACGCCGAGAAAGGCTTCGCCGACGTCAAGGCGGTGCTGGAAGGCGCCAA GTACATCCTCATGGAGCGCTTCGCCGAAGACGCCACGCTGCTCGACAAGCTGCGCGTGTTCATGAAGAACGAAGCGACCCTGACCGCCCGCGTGGTCCCC GGCAAGGAACAGGAAGGCGCCAAGTTCAGCGACTACTTCGAACACGACGAGCCGCTGAAAAGCGCCCCGTCGCACCGCGCCCTGGCGATCTTCCGCGGAC GCAACGAAGGCGTCCTCAGCGCCTCGCTGAAGGTCGGCGAGGAAGCGCCGGGCACCCTGCACCCATGCGAAGTCATGATCGCCGAGCGCTTCGGCCTGTC CAACCAGGGCCGCGCCGCCGACAAGTGGCTGGCCGAGGTGGTGCGCTGGACCTGGAAGGTCAAGCTCTATACCCACCTGGAAACCGACCTGTTCGGCGAG CTCCGCGACGGCGCCGAGGACGAGGCGATCAGCGTGTTCGCGCGCAACCTGCACGACCTGCTGCTGGCCGCCCCGGCCGGCCCGCGCGCCACCCTCGGCC TCGACCCGGGCCTGCGCACCGGGGTCAAGGTCGCGGTGGTCGACGCCACCGGCAAGCTGCTGGACACCGCCACCGTCTACCCACATGCGCCGAAGAACCA GTGGGACCAGACCCTCGCCGTGCTCGCCGCGCTGTGCGCCAAGCACCAGGTCGAGCTGATCGCCATCGGCAACGGCACCGCCAGCCGCGAGACCGACAAG CTGGCCGGCGAACTGATCAAGAAGTATCCGGGCATGAAGCTGACCAAGATCATGGTCAGCGAAGCCGGCGCATCGGTGTATTCCGCCTCCGAACTGGCGG CGAAGGAGTTCCCCGAGCTGGACGTGTCCCTGCGCGGCGCCGTATCCATCGCCCGTCGCCTGCAGGACCCGCTGGCGGAGCTGGTGAAGATCGAGCCCAA GTCGATCGGCGTCGGCCAGTACCAGCACGACGTGTCCCAGCTGAAGCTGGCGCGTAGCCTGGACGCGGTGGTCGAGGATTGCGTGAACGCCGTCGGCGTC GACGTCAACACCGCCTCCGCCGCCCTGCTGGCACGCATCTCCGGCCTCAACTCGACGCTGGCGCAGAACATCGTCGCGCACCGCGACGCCAACGGAGCGT TCCGCACCCGCGACGAGCTGAAGAAAGTCAGCCGCCTGGGCGAAAAGACCTTCGAGCAAGCCGCCGGCTTCCTCCGCGTGATGAACGGCGACAACCCGCT GGACGCCTCGGCGGTGCACCCGGAGACCTATCCGCTGGTGCAGCGCATCGCCGCCGACACCGAGCGCGACATCCGCTCGCTGATCGGCGACTCGGCGTTC CTCAAGCGCCTCGACCCGAAGAAGTTCACCGACGAGACCTTCGGCCTGCCGACCGTCACCGACATCCTCAAGGAACTCGACAAGCCCGGCCGCGACCCGC GTCCGGAGTTCAAGACCGCAGAATTCCAGGAAGGCGTCGAGAGCCTCAAGGACCTCAAGCCGGGCATGGTCCTGGAGGGCGTGGTGACCAACGTCACCAA CTTCGGCGCGTTCGTCGACATCGGCGTCCACCAGGACGGCCTGGTGCACATCTCGGCGCTGTCCGAGAAGTTCGTCAAGGATCCGTACGAAGTGGTCAAG GCCGGCGACATCGTCAAGGTCAAGGTCATGGAAGTGGACATCCCGCGCAACCGTGTCGGCCTGTCCATGCGCATGAGCGACACCCCCGGCGAGAAGGTCG AAGGCCAGCGCGGCGGGCGTCCCACCGGCAGCGGCCAGCCGCGCCAGGAGCGTGGCGCCCCGCGCGGACAGAGCGCGCCGCCGGCGAACAACGCCATGGC CGCGCTGTTCGCCAACGCCAAGCAACTGAAGAAGAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGAGCCGTCCATGAGCGAGATGCCCGCCCGCGAGCAGATGATCAGCGCCTACAGCGAACTGGTCGGCCTGGACCCGGTCAGCCTCGGCGACGGCGTCGC CGAGGTACGCCTGCCGATGGCCGCGCACCTGCGCAACCGCGGCGGGGTCATGCACGGCGGCGCGCTGTTCTCGCTGATGGACGTGACCATGGGGCTGGCC TGCTCCAGTTCCCATGGTTTCGACCGCCAGAGCGTCACCCTGGAATGCAAGATCAACTACATCCGCGCCGTCGCCGACGGCGAGGTGCGCTGCGTCGCCC GCGTCCTCCATGCCGGGCGCCGCAGCCTGGTGGTGGAAGCCGAGGTGCGGCAAGGCGACAAACTGGTCGCGAAAGGACAAGGTACCTTCGCCCAGTTGTA AACCGGCGCGGCCGCCATGCGGCAGAATGGCGCGCAACGGCGATCCCGATCCGTGCCGGGCGCCCGCCTCGACGGCTCCCGCCGAAGTCGCGGCGACCGG
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| Amino Acid Sequence |
>RNA-binding protein
MDSINTRIAEELSALPSGRVQPQQVAAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRMLEERLRYLRELEERRGAILASIEEQGKLTPELARDIKLADT KTRLEDLYLPYKQKRRTKGQIALEAGLGALADALFDDPTLVPESEAARFVDAEKGFADVKAVLEGAKYILMERFAEDATLLDKLRVFMKNEATLTARVVP GKEQEGAKFSDYFEHDEPLKSAPSHRALAIFRGRNEGVLSASLKVGEEAPGTLHPCEVMIAERFGLSNQGRAADKWLAEVVRWTWKVKLYTHLETDLFGE LRDGAEDEAISVFARNLHDLLLAAPAGPRATLGLDPGLRTGVKVAVVDATGKLLDTATVYPHAPKNQWDQTLAVLAALCAKHQVELIAIGNGTASRETDK LAGELIKKYPGMKLTKIMVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQLKLARSLDAVVEDCVNAVGV DVNTASAALLARISGLNSTLAQNIVAHRDANGAFRTRDELKKVSRLGEKTFEQAAGFLRVMNGDNPLDASAVHPETYPLVQRIAADTERDIRSLIGDSAF LKRLDPKKFTDETFGLPTVTDILKELDKPGRDPRPEFKTAEFQEGVESLKDLKPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVK AGDIVKVKVMEVDIPRNRVGLSMRMSDTPGEKVEGQRGGRPTGSGQPRQERGAPRGQSAPPANNAMAALFANAKQLKKK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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