Strain | Pseudomonas aeruginosa strain AZPAE14693 AZPAE14693_contig_20, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACTCACGCACAGAAGACCCACACTTTATCCACAGGTTTCCCCCAGACTGTCACCTTGCAAACACCCCATTAGCGCATTATCTTGTATCCCCATCGTCGCC ACCCCCTATATCTTGGGTTTCGAGCGCACGAACGGCTACAACGGAACCAACCGCGCACGGACCACTCTGATGGCTCCGGCGGCTCCGCAAAAAAGCATTT TCCAGACGTACTGAAAGCATCGACGGCGCTCATCGCAAGGAGCCCTTCATGACGTTGGAAAAGCGGTACGGGTGTTGCAACGGACGCTGTAAACAGACAG TCAACACCACTAGGTATTGTGTTCGACGGCAAAACGCCACGAACCCGCCAGGGCCAGGGAGGCACTCACAGTCCCCACCCTCAGCATTCGAATGAAGCAG CCGCCGCGAGGCCGGCTGCCCGGCTCTTTATCGATTCAAGGGAATGGGCGCCCCGGCGCCCGCTAGCAAAACCATTACGAGAACGTGGAGATACCCACCC
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DNA Sequence for Gene |
>NQ90_RS18845
ATGCATACCGACACCACACGCGAGAACCCGCAGGCCAGCGCGCCGCAGGCCGCCGATTCGTCGCAGGATCTGGCCGCCACCGCGCCGGGCCAGCTACGCG TGATCAAGCGCAACGGCACCGTAGTCCCCTACACCGATGACAAGATCACCGTGGCCATCACCAAGGCGTTCCTCGCCGTGGAAGGCGGCACCGCCGCCGC CTCGTCGCGTATCCATGACACCGTGCGCCGCCTGACCGAGCAGGTCACCGCCACCTTCAAGCGCCGCATGCCGTCCGGCGGCACCATCCACATCGAAGAG ATCCAGGACCAGGTCGAACTGGCCCTGATGCGCGCCGGCGAGCAGAAGGTCGCCCGCGACTACGTGATCTACCGCGAAGCCCGCGCCGCCGAGCGCAAGA ACGCCGGCGCCGCCAGCGATGTCGCCCAGCCGCACCCGAGCATCCGCATCACCCGCGCCGACGGCAGCCTGTCGCCGCTGGACATGGGCCGCCTGAACAC CATCATCAGCGAAGCCTGCGAAGGCCTGGCCGAGGTGGACGGCGCGCTGATCGAGCGCGAGACCCTGAAGAACCTCTACGATGGCGTCGCCGAGAAGGAC GTCAACACCGCCCTGGTGATGACCGCGCGCACCCTGGTCGAGCGCGAGCCGAACTACTCCTACGTCACCGCCCGCCTGCTGATGGACACCCTGCGCGCCG AAGCCCTGGGCTTCCTCGGCGTGGCCGAGAGCGCCACCCATCACGAAATGGCCGAGCTGTACGCCAAGGCCCTGCCGGCCTACATCGAGAAAGGCGCCGA GTTCGAGCTGGTCGATGCCAAGCTGAAGGAATTCGACCTGGAGAAACTGGGCAAGGCCATCGATCACGAGCGCGACCAGCAGTTCACCTACCTCGGCCTG CAGACCCTGTACGACCGCTACTTCATCCACAAGGACGGCATCCGCTTCGAACTGCCGCAGATCTTCTTCATGCGCGTGGCCATGGGCCTGGCCATCGAGG AGAAGGACCGCGAGGCACGCGCCATCGAGTTCTACAACCTGCTGTCGTCCTTCGACTACATGAGTTCCACCCCCACCCTGTTCAACGCCGGCACCCTGCG TCCGCAGCTCTCCAGCTGCTACCTGACCACCGTGCCGGACGACCTGTCGGGCATCTACGGCGCCATCCACGACAACGCCATGCTGTCGAAATTCGCCGGC GGCCTGGGCAACGACTGGACCCCGGTGCGCGCGCTGGGCTCCTACATCAAGGGCACCAACGGCAAGTCCCAGGGCGTCGTGCCCTTCCTGAAAGTGGTCA ACGACACCGCGGTCGCGGTCAACCAGGGCGGCAAGCGCAAGGGCGCGGTCTGCGCCTACCTGGAGACCTGGCACCTGGACATCGAGGAATTCCTCGAGCT GCGCAAGAACACCGGTGACGACCGTCGTCGTACCCACGACATGAACACCGCCAACTGGATCCCCGACCTGTTCATGAAGCGCGTCTTCGACGACGGCTCC TGGACCCTCTTCTCGCCGTCCGACGTCCCCGACCTGCACGACCTCTACGGCAAGGCCTTCGAGGAGCGCTACGAGTACTACGAGGCCCTGGCCAGCTACG GCAAGCTGAAGCTGCACAAGGTCGTCCAGGCCAAGGACCTGTGGCGCAAGATGCTCTCCATGCTGTTCGAGACCGGCCACCCGTGGCTGACCTTCAAGGA CCCGTGCAACCTGCGCAGCCCGCAGCAGCACGTGGGCGTGGTGCACAGCTCGAACCTCTGCACCGAGATCACCCTGAACACCAACAAGGACGAGATCGCC GTCTGCAACCTGGGCTCGATCAACCTGGTCAACCACATCGTCGACGGCAAGCTGGACACCGCCAAGCTGGAGAAGACCGTCAAGACCGCGGTACGCATGC TCGATAACGTCATCGACATCAACTACTACTCGGTCCCGCAGGCGCAGAACTCCAACTTCAAGCACCGTCCGGTCGGCCTGGGCATCATGGGCTTCCAGGA CGCCCTGTACCTGCAGCACATCCCCTACGGTTCGGACGCGGCCATCGCCTTCGCCGACCAGTCCATGGAAGCCATCAGCTACTACGCGATCCAGGCTTCC TGCGACCTGGCCGACGAGCGCGGCGCCTACCAGACCTTCCAGGGCTCGCTGTGGTCGCAAGGCATCCTGCCGATCGACTCGGAGAAGAAGCTGATCGAAG AGCGCGGCGCCAAGTACATCGAAGTCGACCTGTCGGAAACCCTCGACTGGGCACCGCTGCGCGAGCGCGTACAGAAAGGCATCCGCAACTCGAACATCAT GGCCATCGCGCCGACCGCGACCATCGCCAACATCACCGGCGTCTCGCAGTCGATCGAGCCGACCTACCAGAACCTGTACGTGAAGTCGAACCTCTCCGGC GAGTTCACCGTGATCAACCCCTACCTGGTGCGCGACCTCAAGGCCCGCGGCCTGTGGGACCCGGTCATGGTCAACGACCTGAAGTACTACGACGGTTCCG TGCAGCAGATCGAGCGCATCCCGCAGGACCTCAAGGACCTCTACGCCACCGCGTTCGAAGTCGAGACCCGCTGGATCGTCGAAGCCGCCAGCCGTCGCCA GAAGTGGATCGACCAGGCCCAGTCGCTGAACCTGTACATCGCCAGCGCCTCGGGCAAGAAGCTCGACGTGACCTACCGCATGGCCTGGTTCCGCGGCCTG AAGACCACCTACTACCTCCGTGCCCTGGCCGCCACCAGCACCGAGAAGTCCACCATCAACACCGGCAAGCTCAACGCCGTGTCGGCCGGTGGCAACGACG GCCTGCAAGCCGCCCCGGCCGCCGAGCCGAAGCCGGCGCCGGTGCCGCAGGCATGCAGCATCGACAACCCCGACTGCGAAGCCTGCCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGCGCGTCGCTGAACGGCGTCCGTGTCGTGGCCGGGTAAGCCGGACTCCTCCCGTGAGTCCGGCTTGCCCGGCGCCTGACGGTCGCTCGTCCAGCGCCA CGCTGGCAGCGCAAGGCCCCTCGCCAGGGCCAGGAACAATCCCCTTCTTCCCTCCGGGGGAGAAGAACGGCCCGGCCAGACCGTGCCGGACCACCGCTTT CGCGTGCACCTCACGCCCCATATCCAGGCCGCCGAGACGGCCGCCAGACCAGGAGAGAGCAAGATGCTGAGCTGGGACGAATTCGACAAAGAAGACCCGA CCGAAGCCAAGGCCGCGCCCGCCGCCGCCCAGGCCGTTGCCCAGGGCCATGACAAGCTGGACGACGAAGCCGCCGGCTCGGTGGAAGAAGCGCGCGCCGT TTCCGCCGACGACTCCGACGCCGTCGCCCGCGCCAAGAAGGCCCTGAACGACCTCGACATCCAGGAAGGCCTGGACGATCTCGAAGGCTCCGCCGCGCGC
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Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit alpha
MHTDTTRENPQASAPQAADSSQDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVRRLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYREARAAERKNAGAASDVAQPHPSIRITRADGSLSPLDMGRLNTIISEACEGLAEVDGALIERETLKNLYDGVAEKD VNTALVMTARTLVEREPNYSYVTARLLMDTLRAEALGFLGVAESATHHEMAELYAKALPAYIEKGAEFELVDAKLKEFDLEKLGKAIDHERDQQFTYLGL QTLYDRYFIHKDGIRFELPQIFFMRVAMGLAIEEKDREARAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYGAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGS WTLFSPSDVPDLHDLYGKAFEERYEYYEALASYGKLKLHKVVQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA VCNLGSINLVNHIVDGKLDTAKLEKTVKTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAIAFADQSMEAISYYAIQAS CDLADERGAYQTFQGSLWSQGILPIDSEKKLIEERGAKYIEVDLSETLDWAPLRERVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSG EFTVINPYLVRDLKARGLWDPVMVNDLKYYDGSVQQIERIPQDLKDLYATAFEVETRWIVEAASRRQKWIDQAQSLNLYIASASGKKLDVTYRMAWFRGL KTTYYLRALAATSTEKSTINTGKLNAVSAGGNDGLQAAPAAEPKPAPVPQACSIDNPDCEACQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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