Strain | Pseudomonas aeruginosa strain AZPAE14693 AZPAE14693_contig_20, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCAGTTGCCGCGACGGGTGCAGTTTCTGCTGGGCGAAGCGGATGCGCCGTTTGGCGCCGCCTTCCAGGCGGTCGATGTCGTAGCCGAGGGCGCGCAGGCG GTCGCTGTAGACCAGGTGCTCGCGGCTGTGGTGGCCTTCCTGGCCGATGAAGCCACGGATCTGTTGCTTCAGCGCCGGGTCCTCGACCCGTTCGCGGTAG TGGCGCACGGAGTCGATAAAGAAGCGCTCGCCATCGGGGAACAGCACCGACATGGCGTTGAACATGTGGGTCTTGAAAGCGTCGCCGCTGTGCCAATGGC GCGGCATCGGATCGGGCAGGTCGAAGTCCAGATGACGCGGGCGGATCTCCAGACCTTCGGGGGTGGTGCTGGCCATAGCGGCTCCCTGTGATGGTGAAGG ACCATGGGATCGACTATCGCTTGCGGGGGATAGCCTCACAAGGTTATCTTCTGCCAACTTTCCGGTCATATCCGGCCAGCGGTCAGAACAATAAACAACC
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DNA Sequence for Gene |
>NQ90_RS17155
ATGAAACAACCGCTCAATTTCACCGCCGAACTGGTGCCGGTGGCCTATGCCGAGGCACTCCTCGATCTTGTCGCGGAGTACGGCGTATCCCGCCAGGCGC TGTTCGACGCTGCGCGGGTGCGTCCCGAGGTGCTGGACAGCCCGAACGGCCGCCTGTCCTTCCTCGACTTCAACCAGCTCACCTACAGCGCCCAGGCCCT GTGCGGCGAGCCGGCGCTGGGGCTGGTGCTCGGCCAGCGCCTGAACGTCTCCGCCCACGGCATCCTCGGCTACGCGGTGCTGTCCAGCGCCAACTTGGGC AAGGCCATCCAGTTCGCCCTCAAGTACTACCGGGTGCTCGGCCTGGCCTACGAACTGGAACTGGTGCTCGATGACGGCCGCGCCGAGTTGCGCGCGGTGG AGTCGATGCCGCTGGGCGCCGCTTCGGTGTTCGCCGCCGAGGGCCTGATGGCGACGCTGTATTCCATCGCCTGCTTCCTGGTCGGCGAGCCGTTGCAGGA CGTGCGGGTCGGCTTCGCCTATCCGCCGCCGGCCCATGCCCGGCGCTACGCCGAGGTGTTCGGGGTGGCCGCGGAGTTCGAGCAGCCCTGGCACTGGCTG AGCATGCCCAGCGAGTACCTGGAACGACCGATGGCGCTGGCCAACCCGGCCACGGTGCAGATGTGCGAGCAGCAGTGCGAGGCGCTGCTGGCCACCCTGG ACGTCCAGGAAGGCCTGCTGACCCGTGTGCGCCGCCTGCTGCTGGCGCGTCCCGGCGACTTCCCCGATCTCGAACAGGCCGCCCGCGAACTGCACACCAG CGGGCGCAGCCTGCGCCGGCACCTGTCGTCGTTGGGCACCACCTACCAGCAGGTCCTCGACGATGTGCGCAAGCGCCTGGCCCTGCAATACCTGACCACC ACCCAGCTACCGCTGTACGAGATCGCCCTGCTGCTCGGCTTCAACGATTCGTCGAACTTCCGCCGGGCGTTTCGCAAGTGGACCGGCAAGCTGCCCAGCG ACTACCGCGAAGCGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGACGCCGGCGATCCTCGGCAGCGGATGGATGTGCCATGCTTGGCGTTTCATAGAAATCCATGGCGCGCTTGCCGCGCCGACCGTGATCGGAGTCTTG CATGTCGACATCCCCCGCGCTGATCCGCGAAACCTTTCCCGTCGGGCCTTTGCAGTGCAACTGCACCATCATTGGCGATCCGCTGACCAGGAAGGCCATC GTCGTCGATCCGGGCGGCGACCACGAACTGATCCTGCAGCGCCTCGACCGCCTCGGCCTGCAAGTGGTCAGCATCATCCATACCCACGCGCACCTGGATC ACTTCCTCGCCTCCGGCGAGATGAAGAAGCGCACCGGCGCCAGCCTGCACCTGCACAAGGACGACCAGTTCCTCTGGGACAACCTGGAGATGCAGTGCCA GCTGTTCGGCGTGCCCTACACGCCGGTGCCGGCGCCGGACCGCTGGCTGGCCGACGACGAGGAACTGGCCTGCGGTTGCGGAGTGGCACTGCACACGCCG
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Amino Acid Sequence |
>AraC family transcriptional regulator
MKQPLNFTAELVPVAYAEALLDLVAEYGVSRQALFDAARVRPEVLDSPNGRLSFLDFNQLTYSAQALCGEPALGLVLGQRLNVSAHGILGYAVLSSANLG KAIQFALKYYRVLGLAYELELVLDDGRAELRAVESMPLGAASVFAAEGLMATLYSIACFLVGEPLQDVRVGFAYPPPAHARRYAEVFGVAAEFEQPWHWL SMPSEYLERPMALANPATVQMCEQQCEALLATLDVQEGLLTRVRRLLLARPGDFPDLEQAARELHTSGRSLRRHLSSLGTTYQQVLDDVRKRLALQYLTT TQLPLYEIALLLGFNDSSNFRRAFRKWTGKLPSDYREAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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